RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 PTGER2P43116 358 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 KCNJ4P48050 445 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 TTF1Q15361 905 aaPredicted RBP7.83□□□□□ -1.16
TMC1-201ENST00000297784 GRIK5Q16478 980 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 ADCK5Q3MIX3 580 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 RNF214Q8ND24 703 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 JAG2Q9Y219 1238 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 SNX14Q9Y5W7 946 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 ZNF532Q9HCE3 1301 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 PSDA5PKW4 1024 aaPredicted RBP7.83□□□□□ -1.16
TMC1-201ENST00000297784 IDH1O75874 414 aaKnown RBP7.83□□□□□ -1.16
TMC1-201ENST00000297784 HSPD1P10809 573 aaKnown RBP7.83□□□□□ -1.16
TMC1-201ENST00000297784 IL1R1P14778 569 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 PDE6AP16499 860 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 ZGPATQ8N5A5 531 aaKnown RBP7.83□□□□□ -1.16
TMC1-201ENST00000297784 MTFR1LQ9H019 292 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 GGA1Q9UJY5 639 aa7.83□□□□□ -1.16
TMC1-201ENST00000297784 PDS5AQ29RF7 1337 aaKnown RBP7.83□□□□□ -1.16
TMC1-201ENST00000297784 ATP2B4P23634 1241 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 MCM2P49736 904 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 FAM193AP78312 1265 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 UBE3CQ15386 1083 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 TMC4Q7Z404 712 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 CD209Q9NNX6 404 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 RBM8AQ9Y5S9 174 aaKnown RBP7.82□□□□□ -1.16
TMC1-201ENST00000297784 CHAF1AQ13111 956 aaPredicted RBP7.82□□□□□ -1.16
TMC1-201ENST00000297784 CUL4AQ13619 759 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 VPS37DQ86XT2 251 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 MAGEB6Q8N7X4 407 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 KIAA1524Q8TCG1 905 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 APPBP2Q92624 585 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 DENND2AQ9ULE3 1009 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 CDK5RAP2Q96SN8 1893 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 SEMA3EO15041 775 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 ZFYP08048 801 aaPredicted RBP7.82□□□□□ -1.16
TMC1-201ENST00000297784 DPEP1P16444 411 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 PRDX5P30044 214 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 ANAPC15P60006 121 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 TMEM87AQ8NBN3 555 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 MAST2Q6P0Q8 1798 aa7.82□□□□□ -1.16
TMC1-201ENST00000297784 MYH2Q9UKX2 1941 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 RIOK3O14730 519 aaKnown RBP7.81□□□□□ -1.16
TMC1-201ENST00000297784 SLC27A2O14975 620 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 CYP21A2P08686 494 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 PDIA4P13667 645 aaKnown RBP7.81□□□□□ -1.16
TMC1-201ENST00000297784 CREB3L3Q68CJ9 461 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 MPNDQ8N594 471 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 NSUN4Q96CB9 384 aaKnown RBP7.81□□□□□ -1.16
TMC1-201ENST00000297784 INTS4Q96HW7 963 aaKnown RBP7.81□□□□□ -1.16
TMC1-201ENST00000297784 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 COL4A5P29400 1685 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 SPDYE4A6NLX3 237 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 GPAA1O43292 621 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 ADCY5O95622 1261 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 U2AF2P26368 475 aaKnown RBP eCLIP7.81□□□□□ -1.16
TMC1-201ENST00000297784 WASHC4Q2M389 1173 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 STRBPQ96SI9 672 aaKnown RBP7.81□□□□□ -1.16
TMC1-201ENST00000297784 RTFDC1Q9BY42 306 aaPredicted RBP7.81□□□□□ -1.16
TMC1-201ENST00000297784 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.81□□□□□ -1.16
TMC1-201ENST00000297784 GNL3LQ9NVN8 582 aaKnown RBP7.81□□□□□ -1.16
TMC1-201ENST00000297784 ABCF2Q9UG63 623 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 SALL1Q9NSC2 1324 aa7.81□□□□□ -1.16
TMC1-201ENST00000297784 FER1L6Q2WGJ9 1857 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 RIMBP2O15034 1052 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 CPA1P15085 419 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 MECOMQ03112 1051 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 TSGA10IPQ3SY00 556 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 TTLL5Q6EMB2 1281 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 NKX2-3Q8TAU0 364 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 DSCC1Q9BVC3 393 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 RNF216Q9NWF9 866 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 ZNF219Q9P2Y4 722 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 BAZ2AQ9UIF9 1905 aaKnown RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 RPAP1Q9BWH6 1393 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 ADAMTSL1Q8N6G6 1762 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 CCDC66A2RUB6 948 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 C6orf229H3BNL8 230 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 C21orf2O43822 256 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 FGAP02671 866 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 SLFN14P0C7P3 912 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 MAP3K12Q12852 859 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 DPP8Q6V1X1 898 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 ZNF771Q7L3S4 317 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 CREBRFQ8IUR6 639 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 CNKSR1Q969H4 720 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 RIOK1Q9BRS2 568 aaKnown RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 NBPF3Q9H094 633 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 TTC12Q9H892 705 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 LRP2BPQ9P2M1 347 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 CTNNA3Q9UI47 895 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 DDX41Q9UJV9 622 aaKnown RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 MORC2Q9Y6X9 1032 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 KDM4AO75164 1064 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 CCDC183Q5T5S1 534 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 STOX1Q6ZVD7 989 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 ZNF804AQ7Z570 1209 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 LCORLQ8N3X6 602 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 TTC14Q96N46 770 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 ZNF830Q96NB3 372 aaPredicted RBP7.8□□□□□ -1.16
TMC1-201ENST00000297784 UPF3BQ9BZI7 483 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms