RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.22■□□□□ 0.83
NPM1-201ENST00000296930 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.22■□□□□ 0.832e-12■□□□□ 9.5
NPM1-201ENST00000296930 OPTNQ96CV9 577 aa20.22■□□□□ 0.83
NPM1-201ENST00000296930 CSADQ9Y600 493 aa20.22■□□□□ 0.83
NPM1-201ENST00000296930 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
NPM1-201ENST00000296930 IGF2BP3O00425 579 aaKnown RBP eCLIP20.21■□□□□ 0.834e-7■■□□□ 12.3
NPM1-201ENST00000296930 FKTNO75072 461 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 RLBP1P12271 317 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 ADORA1P30542 326 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 TIMM10P62072 90 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 ZGPATQ8N5A5 531 aaKnown RBP20.21■□□□□ 0.83
NPM1-201ENST00000296930 CRBNQ96SW2 442 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 DAGLAQ9Y4D2 1042 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 A0A1B0GUL7 405 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 TFCP2Q12800 502 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 VGLL4Q14135 290 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 DIXDC1Q155Q3 683 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 R3HDMLQ9H3Y0 253 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 AK9Q5TCS8 1911 aa20.21■□□□□ 0.83
NPM1-201ENST00000296930 MYH2Q9UKX2 1941 aa20.2■□□□□ 0.82
NPM1-201ENST00000296930 TESPA1A2RU30 521 aaPredicted RBP20.2■□□□□ 0.82
NPM1-201ENST00000296930 EXOC6Q8TAG9 804 aa20.2■□□□□ 0.82
NPM1-201ENST00000296930 PDS5AQ29RF7 1337 aaKnown RBP20.2■□□□□ 0.82
NPM1-201ENST00000296930 MVPQ14764 893 aaKnown RBP20.19■□□□□ 0.82
NPM1-201ENST00000296930 DCAF15Q66K64 600 aa20.19■□□□□ 0.82
NPM1-201ENST00000296930 CDC42EP5Q6NZY7 148 aa20.19■□□□□ 0.82
NPM1-201ENST00000296930 TMEM57Q8N5G2 664 aa20.19■□□□□ 0.82
NPM1-201ENST00000296930 MLLT1Q03111 559 aaPredicted RBP20.18■□□□□ 0.82
NPM1-201ENST00000296930 RASGRF1Q13972 1273 aa20.18■□□□□ 0.82
NPM1-201ENST00000296930 FAM151AQ8WW52 585 aa20.18■□□□□ 0.82
NPM1-201ENST00000296930 XAGE2Q96GT9 111 aa20.18■□□□□ 0.82
NPM1-201ENST00000296930 MS4A4AQ96JQ5 239 aa20.18■□□□□ 0.82
NPM1-201ENST00000296930 WRNIP1Q96S55 665 aa20.18■□□□□ 0.82
NPM1-201ENST00000296930 PNMA6EA0A0J9YXQ4 647 aa20.17■□□□□ 0.82
NPM1-201ENST00000296930 GTF2A2P52657 109 aa20.17■□□□□ 0.82
NPM1-201ENST00000296930 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
NPM1-201ENST00000296930 PTPN18Q99952 460 aa20.17■□□□□ 0.82
NPM1-201ENST00000296930 SPDYE5A6NIY4 337 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 MS4A1P11836 297 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 SPTY2D1Q68D10 685 aaPredicted RBP20.16■□□□□ 0.82
NPM1-201ENST00000296930 FTSJ3Q8IY81 847 aaKnown RBP20.16■□□□□ 0.82
NPM1-201ENST00000296930 CNKSR2Q8WXI2 1034 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 NEUROD6Q96NK8 337 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 USP40Q9NVE5 1235 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 ERO1BQ86YB8 467 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 DZIP1Q86YF9 867 aaKnown RBP20.16■□□□□ 0.82
NPM1-201ENST00000296930 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 ZNF341Q9BYN7 854 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 ABCF2Q9UG63 623 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 HPS5Q9UPZ3 1129 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 COG6Q9Y2V7 657 aa20.16■□□□□ 0.82
NPM1-201ENST00000296930 TCP10Q12799 353 aa20.15■□□□□ 0.82
NPM1-201ENST00000296930 CRHR2Q13324 411 aa20.15■□□□□ 0.82
NPM1-201ENST00000296930 FBXO46Q6PJ61 603 aaPredicted RBP20.15■□□□□ 0.82
NPM1-201ENST00000296930 SNCAIPQ9Y6H5 919 aa20.15■□□□□ 0.82
NPM1-201ENST00000296930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.15■□□□□ 0.82
NPM1-201ENST00000296930 GAKO14976 1311 aa20.14■□□□□ 0.81
NPM1-201ENST00000296930 NFIAQ12857 509 aa20.14■□□□□ 0.81
NPM1-201ENST00000296930 GORABQ5T7V8 394 aa20.14■□□□□ 0.81
NPM1-201ENST00000296930 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.81
NPM1-201ENST00000296930 BRI3BPQ8WY22 251 aa20.14■□□□□ 0.81
NPM1-201ENST00000296930 ZKSCAN4Q969J2 545 aaPredicted RBP20.14■□□□□ 0.81
NPM1-201ENST00000296930 CCL15-CCL14A0A0B4J2E2 113 aa20.13■□□□□ 0.81
NPM1-201ENST00000296930 CCL15Q16663 113 aa20.13■□□□□ 0.81
NPM1-201ENST00000296930 FAM163AQ96GL9 167 aaPredicted RBP20.13■□□□□ 0.81
NPM1-201ENST00000296930 FAM198AQ9UFP1 575 aa20.13■□□□□ 0.81
NPM1-201ENST00000296930 POLA2Q14181 598 aa20.13■□□□□ 0.81
NPM1-201ENST00000296930 ERICH6Q7L0X2 663 aa20.12■□□□□ 0.81
NPM1-201ENST00000296930 ERO1AQ96HE7 468 aa20.12■□□□□ 0.81
NPM1-201ENST00000296930 IDI2Q9BXS1 227 aa20.12■□□□□ 0.81
NPM1-201ENST00000296930 CETPP11597 493 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 ATP8B2P98198 1209 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 PPIL2Q13356 520 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 ITPRIPQ8IWB1 547 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 SSH3Q8TE77 659 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 HMG20BQ9P0W2 317 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 ZNF112Q9UJU3 913 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 DOCK2Q92608 1830 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 ENTPD3O75355 529 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 ARID4AP29374 1257 aaPredicted RBP20.11■□□□□ 0.81
NPM1-201ENST00000296930 INPP5BP32019 993 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 SOX10P56693 466 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 SNAPC2Q13487 334 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 TAF1CQ15572 869 aaPredicted RBP20.11■□□□□ 0.81
NPM1-201ENST00000296930 SPATA5Q8NB90 893 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 ZFYVE28Q9HCC9 887 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 PPP4R2Q9NY27 417 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 TRIM17Q9Y577 477 aa20.11■□□□□ 0.81
NPM1-201ENST00000296930 MROH7-TTC4A0A0A0MT08 1334 aa20.1■□□□□ 0.81
NPM1-201ENST00000296930 IRF6O14896 467 aa20.1■□□□□ 0.81
NPM1-201ENST00000296930 RGS3P49796 1198 aa20.1■□□□□ 0.81
NPM1-201ENST00000296930 SP3Q02447 781 aa20.1■□□□□ 0.81
NPM1-201ENST00000296930 PPATQ06203 517 aa20.1■□□□□ 0.81
NPM1-201ENST00000296930 GPR108Q9NPR9 543 aa20.1■□□□□ 0.81
NPM1-201ENST00000296930 ZBTB7BO15156 539 aaPredicted RBP20.09■□□□□ 0.81
NPM1-201ENST00000296930 WDHD1O75717 1129 aaPredicted RBP20.09■□□□□ 0.81
NPM1-201ENST00000296930 UQCRFS1P1P0C7P4 283 aa20.09■□□□□ 0.81
NPM1-201ENST00000296930 MECOMQ03112 1051 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms