RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 IQCB1Q15051 598 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 ARHGEF2Q92974 986 aaKnown RBP13.14□□□□□ -0.31
SNIP1-201ENST00000296215 MRGBPQ9NV56 204 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-201ENST00000296215 LRRIQ3A6PVS8 624 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-201ENST00000296215 CDC25BP30305 580 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 SEPT2Q15019 361 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 MAIP1Q8WWC4 291 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 OPTNQ96CV9 577 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 IMPDH2P12268 514 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 YY1P25490 414 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 RUFY4Q6ZNE9 571 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 KCTD17Q8N5Z5 321 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 MIS12Q9H081 205 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-201ENST00000296215 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 CASP10Q92851 521 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-201ENST00000296215 CEP131Q9UPN4 1083 aa13.14□□□□□ -0.31
SNIP1-201ENST00000296215 USP27XA6NNY8 438 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 CLSTN2Q9H4D0 955 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 INTUQ9ULD6 942 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 GMNNO75496 209 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 SMTNP53814 917 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 DRP2Q13474 957 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 HSP90AA4PQ58FG1 418 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 TEX9Q8N6V9 391 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 TSPAN18Q96SJ8 248 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 SIL1Q9H173 461 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 CDC23Q9UJX2 597 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 CHMP2BQ9UQN3 213 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 PRPF40BQ6NWY9 871 aaKnown RBP13.13□□□□□ -0.31
SNIP1-201ENST00000296215 CCDC197Q8NCU1 140 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 CFAP57Q96MR6 1250 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 ZFATQ9P243 1243 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 PPP2R2CQ9Y2T4 447 aa13.13□□□□□ -0.31
SNIP1-201ENST00000296215 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 HAUS2Q9NVX0 235 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 TMA7Q9Y2S6 64 aaKnown RBP13.12□□□□□ -0.31
SNIP1-201ENST00000296215 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
SNIP1-201ENST00000296215 TBC1D8O95759 1140 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 MRPS35P82673 323 aaKnown RBP13.12□□□□□ -0.31
SNIP1-201ENST00000296215 OLFML2BQ68BL8 750 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 ANKRD23Q86SG2 305 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
SNIP1-201ENST00000296215 USP26Q9BXU7 913 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 NACA2Q9H009 215 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 TADA3O75528 432 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 CYB5D1Q6P9G0 228 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 APLFQ8IW19 511 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-201ENST00000296215 GSDMBQ8TAX9 411 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 DKK3Q9UBP4 350 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 PRELID1Q9Y255 219 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 TXNDC9O14530 226 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 SH3BP5O60239 455 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 NOL3O60936 208 aaKnown RBP13.12□□□□□ -0.31
SNIP1-201ENST00000296215 RCN1Q15293 331 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 SIX5Q8N196 739 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 OGFOD1Q8N543 542 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 FBXO41Q8TF61 875 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
SNIP1-201ENST00000296215 TLDC2A0PJX2 215 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 ERICH2A1L162 156 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
SNIP1-201ENST00000296215 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 CNGB3Q9NQW8 809 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 MTUS1Q9ULD2 1270 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 S100BP04271 92 aaPredicted RBP13.11□□□□□ -0.31
SNIP1-201ENST00000296215 MYBL1P10243 752 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 DRAXINQ8NBI3 349 aaPredicted RBP13.11□□□□□ -0.31
SNIP1-201ENST00000296215 PPP1R14BQ96C90 147 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
SNIP1-201ENST00000296215 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
SNIP1-201ENST00000296215 ITM2BQ9Y287 266 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 C21orf2O43822 256 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 NEK2P51955 445 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 SIKE1Q9BRV8 207 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 MYO1AQ9UBC5 1043 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 RABL2AQ9UBK7 228 aaPredicted RBP13.11□□□□□ -0.31
SNIP1-201ENST00000296215 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
SNIP1-201ENST00000296215 KLC1Q07866 573 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 CLMNQ96JQ2 1002 aa13.11□□□□□ -0.31
SNIP1-201ENST00000296215 A0A0G2JS52 829 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms