RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 TMEM87BQ96K49 555 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 USP25Q9UHP3 1055 aa16.36■□□□□ 0.21
NXF1-201ENST00000294172 ZNF831Q5JPB2 1677 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 PNPLA7Q6ZV29 1317 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 IFIT3O14879 490 aaKnown RBP16.35■□□□□ 0.21
NXF1-201ENST00000294172 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
NXF1-201ENST00000294172 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 FAM84BQ96KN1 310 aaPredicted RBP16.35■□□□□ 0.21
NXF1-201ENST00000294172 MYL10Q9BUA6 226 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 DDX19AQ9NUU7 478 aaKnown RBP16.35■□□□□ 0.21
NXF1-201ENST00000294172 RCOR1Q9UKL0 485 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 TACC3Q9Y6A5 838 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 BTAF1O14981 1849 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 RGL2O15211 777 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 KLRK1P26718 216 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
NXF1-201ENST00000294172 LY9Q9HBG7 655 aa16.35■□□□□ 0.21
NXF1-201ENST00000294172 DOCK2Q92608 1830 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 ZBTB43O43298 467 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 MSNP26038 577 aaKnown RBP16.34■□□□□ 0.21
NXF1-201ENST00000294172 RFC4P35249 363 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 PLCB2Q00722 1185 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 CLSTN2Q9H4D0 955 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 CNNM2Q9H8M5 875 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 CDC27P30260 824 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 ME1P48163 572 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 HS1BP3Q53T59 392 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 NAP1L5Q96NT1 182 aaPredicted RBP16.34■□□□□ 0.21
NXF1-201ENST00000294172 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 KRT23Q9C075 422 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 TFCP2L1Q9NZI6 479 aa16.34■□□□□ 0.21
NXF1-201ENST00000294172 MINDY4BA8MYZ0 360 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
NXF1-201ENST00000294172 ATL3Q6DD88 541 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 CCAR1Q8IX12 1150 aaKnown RBP16.33■□□□□ 0.2
NXF1-201ENST00000294172 PHKBQ93100 1093 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 SLC12A7Q9Y666 1083 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 COL1A1P02452 1464 aaPredicted RBP16.33■□□□□ 0.2
NXF1-201ENST00000294172 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 GOLGA8AA7E2F4 631 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 CDKL5O76039 1030 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 TYRO3Q06418 890 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
NXF1-201ENST00000294172 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
NXF1-201ENST00000294172 SCN7AQ01118 1682 aa16.32■□□□□ 0.2
NXF1-201ENST00000294172 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
NXF1-201ENST00000294172 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
NXF1-201ENST00000294172 CCDC39Q9UFE4 941 aa16.32■□□□□ 0.2
NXF1-201ENST00000294172 EP400Q96L91 3159 aa16.32■□□□□ 0.2
NXF1-201ENST00000294172 ADCY5O95622 1261 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 PPARAQ07869 468 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 FAM196AQ6ZSG2 479 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 SGMS1Q86VZ5 419 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 LIFRP42702 1097 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 DYNLL1P63167 89 aaKnown RBP16.31■□□□□ 0.2
NXF1-201ENST00000294172 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 MPNDQ8N594 471 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 ANKRD2Q9GZV1 360 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 MRVI1Q9Y6F6 885 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 AFF2P51816 1311 aa16.31■□□□□ 0.2
NXF1-201ENST00000294172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 HIBADHP31937 336 aaKnown RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 GOLPH3LQ9H4A5 285 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 NOL7Q9UMY1 257 aaKnown RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 ERICH2A1L162 156 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 CCDC73Q6ZRK6 1079 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
NXF1-201ENST00000294172 RTEL1Q9NZ71 1219 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 JAG2Q9Y219 1238 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 THSD7AQ9UPZ6 1657 aa16.3■□□□□ 0.2
NXF1-201ENST00000294172 SMIM22K7EJ46 135 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
NXF1-201ENST00000294172 WTAPQ15007 396 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 STK38Q15208 465 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 FAM217BQ9NTX9 383 aaPredicted RBP16.29■□□□□ 0.2
NXF1-201ENST00000294172 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
NXF1-201ENST00000294172 TM4SF1P30408 202 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms