RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 ERICH6Q7L0X2 663 aa25.14■■□□□ 1.61
RAB28-201ENST00000288723 AACSQ86V21 672 aa25.14■■□□□ 1.61
RAB28-201ENST00000288723 KIF23Q02241 960 aaPredicted RBP25.13■■□□□ 1.61
RAB28-201ENST00000288723 MECOMQ03112 1051 aa25.13■■□□□ 1.61
RAB28-201ENST00000288723 PPP1R12BO60237 982 aaPredicted RBP25.12■■□□□ 1.61
RAB28-201ENST00000288723 ZNF384Q8TF68 577 aa25.12■■□□□ 1.61
RAB28-201ENST00000288723 USP40Q9NVE5 1235 aa25.12■■□□□ 1.61
RAB28-201ENST00000288723 LDLRAD1Q5T700 205 aa25.12■■□□□ 1.61
RAB28-201ENST00000288723 USP2O75604 605 aaPredicted RBP25.11■■□□□ 1.61
RAB28-201ENST00000288723 MKRN3Q13064 507 aaKnown RBP25.11■■□□□ 1.61
RAB28-201ENST00000288723 COL13A1Q5TAT6 717 aaPredicted RBP25.11■■□□□ 1.61
RAB28-201ENST00000288723 BEGAINQ9BUH8 593 aa25.11■■□□□ 1.61
RAB28-201ENST00000288723 RAI14Q9P0K7 980 aa25.11■■□□□ 1.61
RAB28-201ENST00000288723 NFIAQ12857 509 aa25.1■■□□□ 1.61
RAB28-201ENST00000288723 KIF1BPQ96EK5 621 aa25.1■■□□□ 1.61
RAB28-201ENST00000288723 TSKSQ9UJT2 592 aa25.1■■□□□ 1.61
RAB28-201ENST00000288723 GAKO14976 1311 aa25.1■■□□□ 1.61
RAB28-201ENST00000288723 ZAP70P43403 619 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 TCP10Q12799 353 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 CLMNQ96JQ2 1002 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 LRP2BPQ9P2M1 347 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 CYP2E1P05181 493 aaPredicted RBP25.09■■□□□ 1.61
RAB28-201ENST00000288723 MAP3K11Q16584 847 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 FKBP1CQ5VVH2 108 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 FAM83AQ86UY5 434 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 NSUN4Q96CB9 384 aaKnown RBP25.09■■□□□ 1.61
RAB28-201ENST00000288723 ZNF512BQ96KM6 892 aaPredicted RBP25.09■■□□□ 1.61
RAB28-201ENST00000288723 NDUFB9Q9Y6M9 179 aa25.09■■□□□ 1.61
RAB28-201ENST00000288723 MYH2Q9UKX2 1941 aa25.08■■□□□ 1.61
RAB28-201ENST00000288723 CTCFP49711 727 aaPredicted RBP25.08■■□□□ 1.61
RAB28-201ENST00000288723 LBX1P52954 281 aa25.08■■□□□ 1.61
RAB28-201ENST00000288723 SLF2Q8IX21 1173 aa25.08■■□□□ 1.61
RAB28-201ENST00000288723 FAM163AQ96GL9 167 aaPredicted RBP25.08■■□□□ 1.61
RAB28-201ENST00000288723 MROH7-TTC4A0A0A0MT08 1334 aa25.08■■□□□ 1.6
RAB28-201ENST00000288723 BTDP43251 543 aa25.07■■□□□ 1.6
RAB28-201ENST00000288723 CLASRPQ8N2M8 674 aaKnown RBP25.07■■□□□ 1.6
RAB28-201ENST00000288723 CSRNP1Q96S65 589 aa25.07■■□□□ 1.6
RAB28-201ENST00000288723 FAM198AQ9UFP1 575 aa25.07■■□□□ 1.6
RAB28-201ENST00000288723 RAB11FIP3O75154 756 aa25.07■■□□□ 1.6
RAB28-201ENST00000288723 IREB2P48200 963 aaKnown RBP25.07■■□□□ 1.6
RAB28-201ENST00000288723 SLC10A4Q96EP9 437 aa25.07■■□□□ 1.6
RAB28-201ENST00000288723 AKAP11Q9UKA4 1901 aa25.06■■□□□ 1.6
RAB28-201ENST00000288723 HSPA8P11142 646 aaKnown RBP25.06■■□□□ 1.6
RAB28-201ENST00000288723 ZFPM1Q8IX07 1006 aa25.06■■□□□ 1.6
RAB28-201ENST00000288723 CRBNQ96SW2 442 aa25.06■■□□□ 1.6
RAB28-201ENST00000288723 FAM151AQ8WW52 585 aa25.05■■□□□ 1.6
RAB28-201ENST00000288723 PIH1D3Q9NQM4 214 aaKnown RBP25.05■■□□□ 1.6
RAB28-201ENST00000288723 PCDHB15Q9Y5E8 787 aa25.05■■□□□ 1.6
RAB28-201ENST00000288723 GPR75-ASB3A0A0A6YYF3 556 aa25.04■■□□□ 1.6
RAB28-201ENST00000288723 GSTO1P78417 241 aa25.04■■□□□ 1.6
RAB28-201ENST00000288723 SMARCA5O60264 1052 aaPredicted RBP25.03■■□□□ 1.6
RAB28-201ENST00000288723 IFIT2P09913 472 aaKnown RBP25.03■■□□□ 1.6
RAB28-201ENST00000288723 MIGA2Q7L4E1 593 aa25.03■■□□□ 1.6
RAB28-201ENST00000288723 LDHCP07864 332 aa25.02■■□□□ 1.6
RAB28-201ENST00000288723 RGS3P49796 1198 aa25.02■■□□□ 1.6
RAB28-201ENST00000288723 SPRYD7Q5W111 196 aa25.02■■□□□ 1.6
RAB28-201ENST00000288723 ANKRD13AQ8IZ07 590 aa25.02■■□□□ 1.6
RAB28-201ENST00000288723 ANTXR1Q9H6X2 564 aa25.02■■□□□ 1.6
RAB28-201ENST00000288723 RHBDL3P58872 404 aa25.02■■□□□ 1.6
RAB28-201ENST00000288723 IDI2Q9BXS1 227 aa25.02■■□□□ 1.6
RAB28-201ENST00000288723 DDX4Q9NQI0 724 aaKnown RBP25.02■■□□□ 1.6
RAB28-201ENST00000288723 WDHD1O75717 1129 aaPredicted RBP25.01■■□□□ 1.59
RAB28-201ENST00000288723 PICALMQ13492 652 aa25.01■■□□□ 1.59
RAB28-201ENST00000288723 NAA16Q6N069 864 aaPredicted RBP25.01■■□□□ 1.59
RAB28-201ENST00000288723 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.01■■□□□ 1.59
RAB28-201ENST00000288723 ELP3Q9H9T3 547 aa25.01■■□□□ 1.59
RAB28-201ENST00000288723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25■■□□□ 1.592e-7■□□□□ 9.2
RAB28-201ENST00000288723 LRRCC1Q9C099 1032 aa25■■□□□ 1.59
RAB28-201ENST00000288723 RPAP1Q9BWH6 1393 aaPredicted RBP25■■□□□ 1.59
RAB28-201ENST00000288723 TRPA1O75762 1119 aa25■■□□□ 1.59
RAB28-201ENST00000288723 IDH1O75874 414 aaKnown RBP25■■□□□ 1.59
RAB28-201ENST00000288723 ADGRA1Q86SQ6 560 aa25■■□□□ 1.59
RAB28-201ENST00000288723 WNK4Q96J92 1243 aa25■■□□□ 1.59
RAB28-201ENST00000288723 DCTPP1Q9H773 170 aa25■■□□□ 1.59
RAB28-201ENST00000288723 RNF186Q9NXI6 227 aa25■■□□□ 1.59
RAB28-201ENST00000288723 CA12O43570 354 aa24.99■■□□□ 1.59
RAB28-201ENST00000288723 MAP3K9P80192 1104 aa24.99■■□□□ 1.59
RAB28-201ENST00000288723 VGLL4Q14135 290 aa24.99■■□□□ 1.59
RAB28-201ENST00000288723 PRDM10Q9NQV6 1147 aa24.99■■□□□ 1.59
RAB28-201ENST00000288723 RFX7Q2KHR2 1363 aa24.99■■□□□ 1.59
RAB28-201ENST00000288723 MYO5AQ9Y4I1 1855 aaKnown RBP24.98■■□□□ 1.59
RAB28-201ENST00000288723 UNCXA6NJT0 531 aa24.98■■□□□ 1.59
RAB28-201ENST00000288723 GJA5P36382 358 aa24.98■■□□□ 1.59
RAB28-201ENST00000288723 SH3BP5LQ7L8J4 393 aa24.98■■□□□ 1.59
RAB28-201ENST00000288723 CNKSR2Q8WXI2 1034 aa24.98■■□□□ 1.59
RAB28-201ENST00000288723 HOOK2Q96ED9 719 aa24.98■■□□□ 1.59
RAB28-201ENST00000288723 WRNIP1Q96S55 665 aa24.98■■□□□ 1.59
RAB28-201ENST00000288723 AATFQ9NY61 560 aaKnown RBP eCLIP24.98■■□□□ 1.59
RAB28-201ENST00000288723 ENTPD3O75355 529 aa24.98■■□□□ 1.59
RAB28-201ENST00000288723 ZSCAN29Q8IWY8 852 aaPredicted RBP24.98■■□□□ 1.59
RAB28-201ENST00000288723 ZKSCAN4Q969J2 545 aaPredicted RBP24.98■■□□□ 1.59
RAB28-201ENST00000288723 OTOFQ9HC10 1997 aa24.97■■□□□ 1.59
RAB28-201ENST00000288723 DCAF15Q66K64 600 aa24.97■■□□□ 1.59
RAB28-201ENST00000288723 REM2Q8IYK8 340 aaPredicted RBP24.97■■□□□ 1.59
RAB28-201ENST00000288723 SH3RF3Q8TEJ3 882 aaPredicted RBP24.97■■□□□ 1.59
RAB28-201ENST00000288723 DDTLA6NHG4 134 aaPredicted RBP24.96■■□□□ 1.59
RAB28-201ENST00000288723 SLURP2P0DP57 97 aa24.96■■□□□ 1.59
RAB28-201ENST00000288723 DNAJC2Q99543 621 aaKnown RBP24.96■■□□□ 1.59
RAB28-201ENST00000288723 CSADQ9Y600 493 aa24.96■■□□□ 1.59
RAB28-201ENST00000288723 AK9Q5TCS8 1911 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms