RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TAF6LQ9Y6J9 622 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 KRT18P05783 430 aaKnown RBP14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 DRC1Q96MC2 740 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 PLIN2Q99541 437 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 ZNF532Q9HCE3 1301 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 EBAG9O00559 213 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 N4BP3O15049 544 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 MCM3P25205 808 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 DNAJC21Q5F1R6 531 aaKnown RBP14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 IFIT1BQ5T764 474 aaKnown RBP14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 KRT40Q6A162 431 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 STAMQ92783 540 aa14.29□□□□□ -0.12
SLC6A1-201ENST00000287766 PIK3C2BO00750 1634 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 PDIA3P30101 505 aaKnown RBP14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 CLEC17AQ6ZS10 378 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 CLIC4Q9Y696 253 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 NAA16Q6N069 864 aaPredicted RBP14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 KRT23Q9C075 422 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 LZTFL1Q9NQ48 299 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 PCDHA7Q9UN72 937 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 ZNF652Q9Y2D9 606 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 ERBB3P21860 1342 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 ZC3H13Q5T200 1668 aaKnown RBP14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 XPO4Q9C0E2 1151 aaKnown RBP14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 ADCY9O60503 1353 aa14.28□□□□□ -0.12
SLC6A1-201ENST00000287766 POTEB2H3BUK9 544 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 PFKFB2O60825 505 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 CCDC152Q4G0S7 254 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 ESR2Q92731 530 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 KIAA1210Q9ULL0 1709 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 MAATS1Q7Z4T9 603 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.12
SLC6A1-201ENST00000287766 CD163L1Q9NR16 1453 aa14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 NDUFA8P51970 172 aa14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 TOB2Q14106 344 aaPredicted RBP14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 SYCP1Q15431 976 aa14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 NSUN7Q8NE18 718 aaKnown RBP14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 JADE2Q9NQC1 790 aa14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 POLR2DO15514 142 aaKnown RBP14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 DIS3L2Q8IYB7 885 aaKnown RBP14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 MAPK8IP1Q9UQF2 711 aa14.27□□□□□ -0.13
SLC6A1-201ENST00000287766 FANCCQ00597 558 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 ZNF444Q8N0Y2 327 aaPredicted RBP14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 CLIC6Q96NY7 704 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 DIP2CQ9Y2E4 1556 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 TCIRG1Q13488 830 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 PNOCQ13519 176 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 ARID5BQ14865 1188 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 CERS3Q8IU89 383 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 AIFM3Q96NN9 605 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 KCNH3Q9ULD8 1083 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 MAST3O60307 1309 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 GOLGA6L9A6NEM1 432 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 TRIM75PA6NK02 468 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 ZPR1O75312 459 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 MYL5Q02045 173 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 ZNF174Q15697 407 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 ELF2Q15723 593 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 ZNF827Q17R98 1081 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 CACTINQ8WUQ7 758 aaKnown RBP14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 ASAP1Q9ULH1 1129 aa14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 COL3A1P02461 1466 aaPredicted RBP14.26□□□□□ -0.13
SLC6A1-201ENST00000287766 M0R2C6 588 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 TERF1P54274 439 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 KRI1Q8N9T8 703 aaKnown RBP14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 GOPCQ9HD26 462 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 MYOM1P52179 1685 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 ZEB2O60315 1214 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 UBA7P41226 1012 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 OTUD6BQ8N6M0 293 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 PDLIM2Q96JY6 352 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 CNNM2Q9H8M5 875 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 PUF60Q9UHX1 559 aaKnown RBP14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 IDEP14735 1019 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 SYNE4Q8N205 404 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 CTAGE15A4D2H0 777 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 CYP27B1O15528 508 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 CTAGE8P0CG41 777 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 PFKFB1P16118 471 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 GABPB1Q06547 395 aaPredicted RBP14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 CTAGE6Q86UF2 777 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 CTAGE4Q8IX94 777 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 GREM2Q9H772 168 aa14.25□□□□□ -0.13
SLC6A1-201ENST00000287766 MAGEB6P1A0A0J9YX57 407 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 VWA3AA6NCI4 1184 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 SNAP23O00161 211 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 MCM7P33993 719 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 RHOXF2BP0C7M4 288 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 GBP6Q6ZN66 633 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 RHOXF2Q9BQY4 288 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms