RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TEKT1Q969V4 418 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 TTF2Q9UNY4 1162 aaKnown RBP20.96■□□□□ 0.95
PCDH1-201ENST00000287008 COMMD10Q9Y6G5 202 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 C8orf34Q49A92 452 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 SLC27A2O14975 620 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 SGSM2O43147 1006 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 TMX1Q9H3N1 280 aa20.96■□□□□ 0.95
PCDH1-201ENST00000287008 METP08581 1390 aa20.95■□□□□ 0.94
PCDH1-201ENST00000287008 VWA3AA6NCI4 1184 aa20.95■□□□□ 0.94
PCDH1-201ENST00000287008 AOPEPQ8N6M6 819 aa20.95■□□□□ 0.94
PCDH1-201ENST00000287008 GPHNQ9NQX3 736 aaPredicted RBP20.95■□□□□ 0.94
PCDH1-201ENST00000287008 RPL13P26373 211 aaKnown RBP20.95■□□□□ 0.94
PCDH1-201ENST00000287008 SNW1Q13573 536 aaKnown RBP20.95■□□□□ 0.94
PCDH1-201ENST00000287008 PPP2R5BQ15173 497 aa20.95■□□□□ 0.94
PCDH1-201ENST00000287008 DNAJC25Q9H1X3 360 aa20.95■□□□□ 0.94
PCDH1-201ENST00000287008 CCDC65Q8IXS2 484 aa20.95■□□□□ 0.94
PCDH1-201ENST00000287008 PLIN2Q99541 437 aa20.95■□□□□ 0.94
PCDH1-201ENST00000287008 ZNF174Q15697 407 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 DPY19L2Q6NUT2 758 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 NSMFQ6X4W1 530 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 FAM196AQ6ZSG2 479 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 TGFBRAP1Q8WUH2 860 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 SYT1P21579 422 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 KIAA0753Q2KHM9 967 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 ZBTB38Q8NAP3 1195 aaPredicted RBP20.94■□□□□ 0.94
PCDH1-201ENST00000287008 GCOM1H8Y6P7 765 aaPredicted RBP20.94■□□□□ 0.94
PCDH1-201ENST00000287008 ZBED4O75132 1171 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 MYZAPP0CAP1 466 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 PLCD1P51178 756 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 EFCAB6Q5THR3 1501 aa20.94■□□□□ 0.94
PCDH1-201ENST00000287008 ATP2B4P23634 1241 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 ZNF772Q68DY9 489 aaPredicted RBP20.93■□□□□ 0.94
PCDH1-201ENST00000287008 APBB1IPQ7Z5R6 666 aaPredicted RBP20.93■□□□□ 0.94
PCDH1-201ENST00000287008 C2CD5Q86YS7 1000 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 DKC1O60832 514 aaKnown RBP eCLIP20.93■□□□□ 0.94
PCDH1-201ENST00000287008 PCCAP05165 728 aaPredicted RBP20.93■□□□□ 0.94
PCDH1-201ENST00000287008 ATP5JP18859 108 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 SV2BQ7L1I2 683 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 GOLGA6L10A0A0M3HER8 536 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 STX17P56962 302 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 HAUS3Q68CZ6 603 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 NDUFB9Q9Y6M9 179 aa20.93■□□□□ 0.94
PCDH1-201ENST00000287008 USP40Q9NVE5 1235 aa20.92■□□□□ 0.94
PCDH1-201ENST00000287008 IRX3P78415 501 aaPredicted RBP20.92■□□□□ 0.94
PCDH1-201ENST00000287008 MAGI2Q86UL8 1455 aa20.92■□□□□ 0.94
PCDH1-201ENST00000287008 CCT6AP40227 531 aaKnown RBP20.92■□□□□ 0.94
PCDH1-201ENST00000287008 USP44Q9H0E7 712 aa20.92■□□□□ 0.94
PCDH1-201ENST00000287008 CEP83Q9Y592 693 aa20.92■□□□□ 0.94
PCDH1-201ENST00000287008 NOP56O00567 594 aaKnown RBP20.92■□□□□ 0.94
PCDH1-201ENST00000287008 TFAP4Q01664 338 aa20.92■□□□□ 0.94
PCDH1-201ENST00000287008 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
PCDH1-201ENST00000287008 DIS3L2Q8IYB7 885 aaKnown RBP20.92■□□□□ 0.94
PCDH1-201ENST00000287008 PRPHP41219 470 aa20.91■□□□□ 0.94
PCDH1-201ENST00000287008 LLPHQ9BRT6 129 aaKnown RBP20.91■□□□□ 0.94
PCDH1-201ENST00000287008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.91■□□□□ 0.94
PCDH1-201ENST00000287008 FSD2A1L4K1 749 aa20.91■□□□□ 0.94
PCDH1-201ENST00000287008 ARID5AQ03989 594 aa20.91■□□□□ 0.94
PCDH1-201ENST00000287008 TTC16Q8NEE8 873 aa20.91■□□□□ 0.94
PCDH1-201ENST00000287008 CSADQ9Y600 493 aa20.91■□□□□ 0.94
PCDH1-201ENST00000287008 PTGS1P23219 599 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 RXRBP28702 533 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 EAPPQ56P03 285 aaPredicted RBP20.9■□□□□ 0.94
PCDH1-201ENST00000287008 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 PIK3AP1Q6ZUJ8 805 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 LZTS2Q9BRK4 669 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 MAP3K15Q6ZN16 1313 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 DPH6Q7L8W6 267 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 MSANTD4Q8NCY6 345 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 ASAP1Q9ULH1 1129 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 POTEB2H3BUK9 544 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 CHMP2AO43633 222 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 NEK11Q8NG66 645 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 SMCR8Q8TEV9 937 aaPredicted RBP20.9■□□□□ 0.94
PCDH1-201ENST00000287008 MYCLP12524 364 aaPredicted RBP20.9■□□□□ 0.94
PCDH1-201ENST00000287008 LMAN1P49257 510 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 SMTNP53814 917 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 MAP2K1Q02750 393 aaPredicted RBP20.9■□□□□ 0.94
PCDH1-201ENST00000287008 ZNF354CQ86Y25 554 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 RGS22Q8NE09 1264 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 CCDC42Q96M95 316 aa20.9■□□□□ 0.94
PCDH1-201ENST00000287008 TAF12Q16514 161 aa20.89■□□□□ 0.94
PCDH1-201ENST00000287008 PLXNC1O60486 1568 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 IL6STP40189 918 aaPredicted RBP20.89■□□□□ 0.93
PCDH1-201ENST00000287008 PPP1R2P41236 205 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 TYRO3Q06418 890 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 LRRC45Q96CN5 670 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 NCOA5Q9HCD5 579 aaKnown RBP20.89■□□□□ 0.93
PCDH1-201ENST00000287008 CRKLP46109 303 aaKnown RBP20.89■□□□□ 0.93
PCDH1-201ENST00000287008 NONOQ15233 471 aaKnown RBP eCLIP20.89■□□□□ 0.93
PCDH1-201ENST00000287008 TTC12Q9H892 705 aaPredicted RBP20.89■□□□□ 0.93
PCDH1-201ENST00000287008 WDR17Q8IZU2 1322 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 USP17L12C9JPN9 530 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 USP17L21D6R901 530 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 TRIM37O94972 964 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 CTDSPL2Q05D32 466 aa20.89■□□□□ 0.93
PCDH1-201ENST00000287008 ARPP21Q9UBL0 812 aaPredicted RBP20.88■□□□□ 0.93
PCDH1-201ENST00000287008 SKILP12757 684 aa20.88■□□□□ 0.93
PCDH1-201ENST00000287008 GYG1P46976 350 aa20.88■□□□□ 0.93
PCDH1-201ENST00000287008 KIAA0825Q8IV33 1275 aa20.88■□□□□ 0.93
PCDH1-201ENST00000287008 SSH3Q8TE77 659 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms