RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 MARCH6O60337 910 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 TSPY3P0CV98 308 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 TSPY8P0CW00 308 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 RPS6KB1P23443 525 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 CAMK4Q16566 473 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 ILDR1Q86SU0 546 aaPredicted RBP10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 PANK2Q9BZ23 570 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 MARF1Q9Y4F3 1742 aaKnown RBP10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 MRC1P22897 1456 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 SLURP2P0DP57 97 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 BTDP43251 543 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 WTAPQ15007 396 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 SPTY2D1Q68D10 685 aaPredicted RBP10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 TCP10L2B9ZVM9 353 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 ADD1P35611 737 aaKnown RBP10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 STX6O43752 255 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 CLSTN1O94985 981 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 CD209Q9NNX6 404 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 ZNF609O15014 1411 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 NMT2O60551 498 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 ADRA2BP18089 450 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 SF3B3Q15393 1217 aaKnown RBP10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 PLA2G12BQ9BX93 195 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 TMOD2Q9NZR1 351 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 POLLQ9UGP5 575 aa10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
CCDC144B-201ENST00000285176 LDHCP07864 332 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 IFIT1BQ5T764 474 aaKnown RBP10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 CNPY2Q9Y2B0 182 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 PXDNLA1KZ92 1463 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 POLRMTO00411 1230 aaKnown RBP10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 DNM1Q05193 864 aaKnown RBP10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 RAB3GAP1Q15042 981 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 GPR108Q9NPR9 543 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 RGS17Q9UGC6 210 aaPredicted RBP10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 SALL3Q9BXA9 1300 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 ZBTB43O43298 467 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 BBOX1O75936 387 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 GOLGA8HP0CJ92 632 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 ME1P48163 572 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 GRIK5Q16478 980 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 TBC1D16Q8TBP0 767 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 WDR66Q8TBY9 1149 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 ZNF526Q8TF50 670 aaPredicted RBP10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 MASTLQ96GX5 879 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 USP40Q9NVE5 1235 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 PES1O00541 588 aaKnown RBP10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 SYT1P21579 422 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 ANAPC15P60006 121 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 EVX2Q03828 476 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 GRM1Q13255 1194 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 STOX1Q6ZVD7 989 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 ADGRA1Q86SQ6 560 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 C8orf76Q96K31 380 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 CPVLQ9H3G5 476 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 BRPF3Q9ULD4 1205 aa10.54□□□□□ -0.72
CCDC144B-201ENST00000285176 NPR1P16066 1061 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 DPEP1P16444 411 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 PDE4BQ07343 736 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 TRIM22Q8IYM9 498 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 EYA3Q99504 573 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 AHDC1Q5TGY3 1603 aaPredicted RBP10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 MRE11P49959 708 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 CLEC10AQ8IUN9 316 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 SH3RF3Q8TEJ3 882 aaPredicted RBP10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 ESR2Q92731 530 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 BRIP1Q9BX63 1249 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 BAG4O95429 457 aaKnown RBP10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 ATP2B4P23634 1241 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 PPARAQ07869 468 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 TTLL6Q8N841 843 aa10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 WDR33Q9C0J8 1336 aaKnown RBP10.53□□□□□ -0.72
CCDC144B-201ENST00000285176 COL18A1P39060 1754 aa10.52□□□□□ -0.72
CCDC144B-201ENST00000285176 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.72
CCDC144B-201ENST00000285176 ZSCAN31Q96LW9 406 aaPredicted RBP10.52□□□□□ -0.72
CCDC144B-201ENST00000285176 AIFM3Q96NN9 605 aa10.52□□□□□ -0.72
CCDC144B-201ENST00000285176 STRBPQ96SI9 672 aaKnown RBP10.52□□□□□ -0.72
CCDC144B-201ENST00000285176 PATL2C9JE40 543 aaKnown RBP10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 PDCP20941 246 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 IARSP41252 1262 aaKnown RBP10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 TFAP4Q01664 338 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 SAFBQ15424 915 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 CCDC73Q6ZRK6 1079 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 CTCFLQ8NI51 663 aaPredicted RBP10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 PNPLA7Q6ZV29 1317 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 MIGA2Q7L4E1 593 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 CNKSR1Q969H4 720 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 SNX21Q969T3 373 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 SDF4Q9BRK5 362 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 RNF41Q9H4P4 317 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms