RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 TRPM2O94759 1503 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 TMEM221A6NGB7 291 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 B4DLN1 442 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 APAF1O14727 1248 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 VPS53Q5VIR6 699 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 GBP7Q8N8V2 638 aaPredicted RBP12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
ERGIC3-201ENST00000279052 INHBCP55103 352 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 HOOK3Q86VS8 718 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 UHMK1Q8TAS1 419 aaKnown RBP12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 VCPKMTQ9H867 229 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 KCNA2P16389 499 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 CEP57L1Q8IYX8 460 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 WHAMMQ8TF30 809 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 MPHOSPH6Q99547 160 aaKnown RBP12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 GBP3Q9H0R5 595 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 SETD1BQ9UPS6 1966 aaKnown RBP12.03□□□□□ -0.48
ERGIC3-201ENST00000279052 CCDC69A6NI79 296 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 MEFVO15553 781 aaPredicted RBP12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 PARP1P09874 1014 aaKnown RBP12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 HDAC4P56524 1084 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 DYNC1I2Q13409 638 aaKnown RBP12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 KRT72Q14CN4 511 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 OTUD6AQ7L8S5 288 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 FAM76AQ8TAV0 307 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 PPP1R13BQ96KQ4 1090 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 PHF24Q9UPV7 400 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 PTPRTO14522 1441 aa12.02□□□□□ -0.48
ERGIC3-201ENST00000279052 EIF3FO00303 357 aaPredicted RBP12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 ETF1P62495 437 aaKnown RBP12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 NSUN2Q08J23 767 aaKnown RBP eCLIP12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 CLPPQ16740 277 aaPredicted RBP12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 BEND6Q5SZJ8 279 aaPredicted RBP12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 ZFYVE27Q5T4F4 411 aa12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 YTHDF3Q7Z739 585 aaKnown RBP12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 ACSBG1Q96GR2 724 aa12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 EPC1Q9H2F5 836 aa12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 HOOK1Q9UJC3 728 aaKnown RBP12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
ERGIC3-201ENST00000279052 ZFXP17010 805 aaPredicted RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 GALNT17Q6IS24 598 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 RSRC2Q7L4I2 434 aaKnown RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 LUZP1Q86V48 1076 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 DZIP1Q86YF9 867 aaKnown RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 ANKRD13BQ86YJ7 626 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 SENP2Q9HC62 589 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 SLC40A1Q9NP59 571 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 TUBGCP4Q9UGJ1 667 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 SMIM24O75264 130 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 PDHBP11177 359 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 TXLNAP40222 546 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 IFFO1Q0D2I5 559 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 KIF4BQ2VIQ3 1234 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 FAAH2Q6GMR7 532 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 ZWILCHQ9H900 591 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 MYO1AQ9UBC5 1043 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 MYCLP1P12525 358 aaPredicted RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 TRIM21P19474 475 aaKnown RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 GOLGA1Q92805 767 aa12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
ERGIC3-201ENST00000279052 LINGO3P0C6S8 592 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 BTG3Q14201 252 aaPredicted RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 APLFQ8IW19 511 aaPredicted RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 BCAS4Q8TDM0 211 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 NAT10Q9H0A0 1025 aaKnown RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 ZNHIT6Q9NWK9 470 aaKnown RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 AATFQ9NY61 560 aaKnown RBP eCLIP12□□□□□ -0.49
ERGIC3-201ENST00000279052 SUGT1Q9Y2Z0 365 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 CLTCL1P53675 1640 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 ZCCHC11Q5TAX3 1644 aaKnown RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 A0A1B0GVG6 124 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 RNF40O75150 1001 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 PHACTR2O75167 634 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 ALOX15P16050 662 aaPredicted RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 SMARCA1P28370 1054 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 USP5P45974 858 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 KCNJ6P48051 423 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 FAM228AQ86W67 206 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 HOMER1Q86YM7 354 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 SMARCC1Q92922 1105 aaPredicted RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 PAIP2BQ9ULR5 123 aaKnown RBP12□□□□□ -0.49
ERGIC3-201ENST00000279052 GMEB1Q9Y692 573 aa12□□□□□ -0.49
ERGIC3-201ENST00000279052 GOLGA6L7A0A1B0GV03 622 aa11.99□□□□□ -0.49
ERGIC3-201ENST00000279052 STK10O94804 968 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms