RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CCDC112Q8NEF3 446 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 ZNF397Q8NF99 534 aaPredicted RBP12.07□□□□□ -0.48
UPF3B-201ENST00000276201 ARID3AQ99856 593 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 BICC1Q9H694 974 aaKnown RBP12.07□□□□□ -0.48
UPF3B-201ENST00000276201 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 TUBB4AP04350 444 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 DHX8Q14562 1220 aaKnown RBP12.07□□□□□ -0.48
UPF3B-201ENST00000276201 AOC3Q16853 763 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 BSDC1Q9NW68 430 aaPredicted RBP12.07□□□□□ -0.48
UPF3B-201ENST00000276201 HMG20BQ9P0W2 317 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 CHMP3Q9Y3E7 222 aa12.07□□□□□ -0.48
UPF3B-201ENST00000276201 PTH1RQ03431 593 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
UPF3B-201ENST00000276201 NYAP1Q6ZVC0 841 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 SUPT20HQ8NEM7 779 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 LEO1Q8WVC0 666 aaPredicted RBP12.06□□□□□ -0.48
UPF3B-201ENST00000276201 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
UPF3B-201ENST00000276201 RFX7Q2KHR2 1363 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 ANKRD18BA2A2Z9 1011 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
UPF3B-201ENST00000276201 SRGAP3O43295 1099 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 PPIP5K2O43314 1243 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 IFIT5Q13325 482 aaKnown RBP12.06□□□□□ -0.48
UPF3B-201ENST00000276201 ADCK5Q3MIX3 580 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 RABL6Q3YEC7 729 aaPredicted RBP12.06□□□□□ -0.48
UPF3B-201ENST00000276201 CREB3L3Q68CJ9 461 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 LUZP1Q86V48 1076 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 LARGE2Q8N3Y3 721 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 KIF18AQ8NI77 898 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 POLLQ9UGP5 575 aa12.06□□□□□ -0.48
UPF3B-201ENST00000276201 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 IGHMBP2P38935 993 aaKnown RBP12.05□□□□□ -0.48
UPF3B-201ENST00000276201 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 ATL3Q6DD88 541 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
UPF3B-201ENST00000276201 TRIM5Q9C035 493 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 DACT1Q9NYF0 836 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 MINPP1Q9UNW1 487 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 ZNF541Q9H0D2 1346 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 FZD9O00144 591 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 KCNJ6P48051 423 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 IQCB1Q15051 598 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 CDC37L1Q7L3B6 337 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 ERO1AQ96HE7 468 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 SPATA32Q96LK8 384 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
UPF3B-201ENST00000276201 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 ZSCAN16Q9H4T2 348 aaPredicted RBP12.05□□□□□ -0.48
UPF3B-201ENST00000276201 NMRK2Q9NPI5 230 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
UPF3B-201ENST00000276201 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
UPF3B-201ENST00000276201 XDHP47989 1333 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 ZNF165P49910 485 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 CEP135Q66GS9 1140 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 KRT222Q8N1A0 295 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
UPF3B-201ENST00000276201 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 ZNF594Q96JF6 807 aaPredicted RBP12.04□□□□□ -0.48
UPF3B-201ENST00000276201 CLIP2Q9UDT6 1046 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 GOLGA6L4A6NEF3 574 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 C6orf229H3BNL8 230 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 SLC27A2O14975 620 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 UFL1O94874 794 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 LRRC8AQ8IWT6 810 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 GGA1Q9UJY5 639 aa12.04□□□□□ -0.48
UPF3B-201ENST00000276201 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 WTIPA6NIX2 430 aaPredicted RBP12.03□□□□□ -0.48
UPF3B-201ENST00000276201 MAP4K4O95819 1239 aaPredicted RBP12.03□□□□□ -0.48
UPF3B-201ENST00000276201 LRMPQ12912 555 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 RESTQ13127 1097 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 TPD52L1Q16890 204 aaPredicted RBP12.03□□□□□ -0.48
UPF3B-201ENST00000276201 NIM1KQ8IY84 436 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 A0A1B0GUL6 1792 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 CCDC66A2RUB6 948 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 KIF3CO14782 793 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 DDNO94850 711 aaPredicted RBP12.03□□□□□ -0.48
UPF3B-201ENST00000276201 CPA1P15085 419 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 KRT32Q14532 448 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 BLOC1S2Q6QNY1 142 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 DRC7Q8IY82 874 aa12.03□□□□□ -0.48
UPF3B-201ENST00000276201 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
UPF3B-201ENST00000276201 GSDMDP57764 484 aa12.02□□□□□ -0.49
UPF3B-201ENST00000276201 TERF2Q15554 542 aa12.02□□□□□ -0.49
UPF3B-201ENST00000276201 STX1AQ16623 288 aa12.02□□□□□ -0.49
UPF3B-201ENST00000276201 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
UPF3B-201ENST00000276201 PGBD1Q96JS3 809 aa12.02□□□□□ -0.49
UPF3B-201ENST00000276201 IMPACTQ9P2X3 320 aa12.02□□□□□ -0.49
UPF3B-201ENST00000276201 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms