RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 RRAGBQ5VZM2 374 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 TTC14Q96N46 770 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 CTDP1Q9Y5B0 961 aaPredicted RBP16.73■□□□□ 0.27
CNOT9-201ENST00000273064 PDE8BO95263 885 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 STIM1Q13586 685 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 GIGYF2Q6Y7W6 1299 aaKnown RBP16.73■□□□□ 0.27
CNOT9-201ENST00000273064 KAZALD1Q96I82 304 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
CNOT9-201ENST00000273064 UBA5Q9GZZ9 404 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 SEC63Q9UGP8 760 aaKnown RBP16.73■□□□□ 0.27
CNOT9-201ENST00000273064 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
CNOT9-201ENST00000273064 CNNM2Q9H8M5 875 aa16.72■□□□□ 0.27
CNOT9-201ENST00000273064 LZTFL1Q9NQ48 299 aa16.72■□□□□ 0.27
CNOT9-201ENST00000273064 ZC3H13Q5T200 1668 aaKnown RBP16.72■□□□□ 0.27
CNOT9-201ENST00000273064 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
CNOT9-201ENST00000273064 PFKFB2O60825 505 aa16.72■□□□□ 0.27
CNOT9-201ENST00000273064 KCNH3Q9ULD8 1083 aa16.72■□□□□ 0.27
CNOT9-201ENST00000273064 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
CNOT9-201ENST00000273064 DYNC1I1O14576 645 aa16.71■□□□□ 0.27
CNOT9-201ENST00000273064 CCT6AP40227 531 aaKnown RBP16.71■□□□□ 0.27
CNOT9-201ENST00000273064 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
CNOT9-201ENST00000273064 HS1BP3Q53T59 392 aa16.71■□□□□ 0.27
CNOT9-201ENST00000273064 IFNL3Q8IZI9 196 aa16.71■□□□□ 0.27
CNOT9-201ENST00000273064 ZNHIT6Q9NWK9 470 aaKnown RBP16.71■□□□□ 0.27
CNOT9-201ENST00000273064 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
CNOT9-201ENST00000273064 TNNT3P45378 269 aaPredicted RBP16.71■□□□□ 0.27
CNOT9-201ENST00000273064 NLRP10Q86W26 655 aa16.71■□□□□ 0.27
CNOT9-201ENST00000273064 MRVI1Q9Y6F6 885 aa16.71■□□□□ 0.27
CNOT9-201ENST00000273064 MTX1Q13505 466 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 COL9A3Q14050 684 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-201ENST00000273064 PIK3AP1Q6ZUJ8 805 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-201ENST00000273064 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 KRI1Q8N9T8 703 aaKnown RBP16.7■□□□□ 0.26
CNOT9-201ENST00000273064 RTCBQ9Y3I0 505 aaKnown RBP16.7■□□□□ 0.26
CNOT9-201ENST00000273064 HEG1Q9ULI3 1381 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 H7C1W4 665 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 MCAMP43121 646 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 KIAA1328Q86T90 577 aa16.7■□□□□ 0.26
CNOT9-201ENST00000273064 XPO4Q9C0E2 1151 aaKnown RBP16.7■□□□□ 0.26
CNOT9-201ENST00000273064 PIH1D3Q9NQM4 214 aaKnown RBP16.7■□□□□ 0.26
CNOT9-201ENST00000273064 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-201ENST00000273064 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 LOC102724428A0A0B4J2F2 783 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
CNOT9-201ENST00000273064 PFKFB1P16118 471 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 SIK1P57059 783 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 CCDC12Q8WUD4 166 aaPredicted RBP16.69■□□□□ 0.26
CNOT9-201ENST00000273064 LLPHQ9BRT6 129 aaKnown RBP16.69■□□□□ 0.26
CNOT9-201ENST00000273064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■□□□□ 10.3
CNOT9-201ENST00000273064 DYNLL1P63167 89 aaKnown RBP16.69■□□□□ 0.26
CNOT9-201ENST00000273064 FBXO18Q8NFZ0 1043 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
CNOT9-201ENST00000273064 GSDMDP57764 484 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 ZFP91Q96JP5 570 aaPredicted RBP16.69■□□□□ 0.26
CNOT9-201ENST00000273064 DRC1Q96MC2 740 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 CARD10Q9BWT7 1032 aa16.69■□□□□ 0.26
CNOT9-201ENST00000273064 CDC25AP30304 524 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 NR5A1Q13285 461 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 PDIA6Q15084 440 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 HSP90B2PQ58FF3 399 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 GRAMD1CQ8IYS0 662 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 PGBD1Q96JS3 809 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 BAG3O95817 575 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 DPCR1Q3MIW9 517 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 LONRF3Q496Y0 759 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 LMTK3Q96Q04 1460 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 HIBADHP31937 336 aaKnown RBP16.68■□□□□ 0.26
CNOT9-201ENST00000273064 CHRNDQ07001 517 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 MAPKAPK5Q8IW41 473 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 BLZF1Q9H2G9 400 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
CNOT9-201ENST00000273064 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
CNOT9-201ENST00000273064 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 MTIF2P46199 727 aaKnown RBP16.67■□□□□ 0.26
CNOT9-201ENST00000273064 VPS16Q9H269 839 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 KIF5BP33176 963 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 ZNF76P36508 570 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 GPS2Q13227 327 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 TMTC2Q8N394 836 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 TRIM47Q96LD4 638 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 GPR101Q96P66 508 aaPredicted RBP16.67■□□□□ 0.26
CNOT9-201ENST00000273064 DENND2AQ9ULE3 1009 aa16.67■□□□□ 0.26
CNOT9-201ENST00000273064 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.265e-14■□□□□ 9.9
CNOT9-201ENST00000273064 SPATA31A3Q5VYP0 1347 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 U2AF2P26368 475 aaKnown RBP eCLIP16.66■□□□□ 0.265e-7■■□□□ 12.1
CNOT9-201ENST00000273064 STAT6P42226 847 aa16.66■□□□□ 0.26
CNOT9-201ENST00000273064 FANCCQ00597 558 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms