RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CCDC8Q9H0W5 538 aaPredicted RBP29.72■■■□□ 2.35
SSBP4-201ENST00000270061 WBP1LQ9NX94 342 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 SEMA3EO15041 775 aa29.71■■■□□ 2.35
SSBP4-201ENST00000270061 RILPL2Q969X0 211 aa29.71■■■□□ 2.35
SSBP4-201ENST00000270061 DENND2AQ9ULE3 1009 aa29.71■■■□□ 2.35
SSBP4-201ENST00000270061 MAST3O60307 1309 aa29.71■■■□□ 2.35
SSBP4-201ENST00000270061 TEKT1Q969V4 418 aa29.7■■■□□ 2.35
SSBP4-201ENST00000270061 XAGE2Q96GT9 111 aa29.7■■■□□ 2.35
SSBP4-201ENST00000270061 NEUROD6Q96NK8 337 aa29.69■■■□□ 2.34
SSBP4-201ENST00000270061 PPP2R3BQ9Y5P8 575 aa29.69■■■□□ 2.34
SSBP4-201ENST00000270061 CHMLP26374 656 aa29.69■■■□□ 2.34
SSBP4-201ENST00000270061 ZNF157P51786 506 aaPredicted RBP29.69■■■□□ 2.34
SSBP4-201ENST00000270061 TTLL12Q14166 644 aaPredicted RBP29.69■■■□□ 2.34
SSBP4-201ENST00000270061 NOGQ13253 232 aa29.68■■■□□ 2.34
SSBP4-201ENST00000270061 SPDYE2Q495Y8 402 aa29.68■■■□□ 2.34
SSBP4-201ENST00000270061 CCDC102AQ96A19 550 aa29.68■■■□□ 2.34
SSBP4-201ENST00000270061 MRIQ9BWK5 157 aa29.68■■■□□ 2.34
SSBP4-201ENST00000270061 TDRD3Q9H7E2 651 aaKnown RBP29.68■■■□□ 2.34
SSBP4-201ENST00000270061 AK9Q5TCS8 1911 aa29.68■■■□□ 2.34
SSBP4-201ENST00000270061 ZBTB22O15209 634 aa29.67■■■□□ 2.34
SSBP4-201ENST00000270061 ZNF70Q9UC06 446 aaPredicted RBP29.67■■■□□ 2.34
SSBP4-201ENST00000270061 FOXN1O15353 648 aa29.67■■■□□ 2.34
SSBP4-201ENST00000270061 TNFAIP1Q13829 316 aa29.67■■■□□ 2.34
SSBP4-201ENST00000270061 MOB2Q70IA6 237 aa29.67■■■□□ 2.34
SSBP4-201ENST00000270061 TLR7Q9NYK1 1049 aaKnown RBP29.67■■■□□ 2.34
SSBP4-201ENST00000270061 REC8O95072 547 aa29.66■■■□□ 2.34
SSBP4-201ENST00000270061 SALL1Q9NSC2 1324 aa29.65■■■□□ 2.34
SSBP4-201ENST00000270061 GORABQ5T7V8 394 aa29.65■■■□□ 2.34
SSBP4-201ENST00000270061 ZDHHC15Q96MV8 337 aa29.65■■■□□ 2.34
SSBP4-201ENST00000270061 BEGAINQ9BUH8 593 aa29.65■■■□□ 2.34
SSBP4-201ENST00000270061 DBNLQ9UJU6 430 aaKnown RBP29.65■■■□□ 2.34
SSBP4-201ENST00000270061 RASGRF1Q13972 1273 aa29.64■■■□□ 2.34
SSBP4-201ENST00000270061 ESYT1Q9BSJ8 1104 aa29.64■■■□□ 2.34
SSBP4-201ENST00000270061 USP26Q9BXU7 913 aa29.64■■■□□ 2.34
SSBP4-201ENST00000270061 FAM155AB1AL88 458 aaPredicted RBP29.64■■■□□ 2.34
SSBP4-201ENST00000270061 UBE2Q2LH0YL09 131 aa29.64■■■□□ 2.34
SSBP4-201ENST00000270061 LDHBP07195 334 aaKnown RBP29.64■■■□□ 2.34
SSBP4-201ENST00000270061 PRDX5P30044 214 aa29.64■■■□□ 2.34
SSBP4-201ENST00000270061 RASA3Q14644 834 aa29.64■■■□□ 2.34
SSBP4-201ENST00000270061 HHIPL2Q6UWX4 724 aa29.64■■■□□ 2.34
SSBP4-201ENST00000270061 MYH2Q9UKX2 1941 aa29.64■■■□□ 2.33
SSBP4-201ENST00000270061 ATP5JP18859 108 aa29.63■■■□□ 2.33
SSBP4-201ENST00000270061 ZGPATQ8N5A5 531 aaKnown RBP29.63■■■□□ 2.33
SSBP4-201ENST00000270061 EVI5LQ96CN4 794 aa29.63■■■□□ 2.33
SSBP4-201ENST00000270061 PDS5AQ29RF7 1337 aaKnown RBP29.63■■■□□ 2.33
SSBP4-201ENST00000270061 PRKG1Q13976 671 aa29.62■■■□□ 2.33
SSBP4-201ENST00000270061 SUPT20HL1Q3ZLR7 823 aa29.62■■■□□ 2.33
SSBP4-201ENST00000270061 ARMC9Q7Z3E5 817 aa29.62■■■□□ 2.33
SSBP4-201ENST00000270061 MAP4K4O95819 1239 aaPredicted RBP29.62■■■□□ 2.33
SSBP4-201ENST00000270061 SLC10A3P09131 477 aa29.62■■■□□ 2.33
SSBP4-201ENST00000270061 CTCFP49711 727 aaPredicted RBP29.62■■■□□ 2.33
SSBP4-201ENST00000270061 AKAP11Q9UKA4 1901 aa29.6■■■□□ 2.33
SSBP4-201ENST00000270061 TCP10L2B9ZVM9 353 aa29.6■■■□□ 2.33
SSBP4-201ENST00000270061 TNNI2P48788 182 aa29.6■■■□□ 2.33
SSBP4-201ENST00000270061 APOBEC3HQ6NTF7 200 aaKnown RBP29.6■■■□□ 2.33
SSBP4-201ENST00000270061 ZIC5Q96T25 663 aa29.6■■■□□ 2.33
SSBP4-201ENST00000270061 EPB41L2O43491 1005 aaKnown RBP29.59■■■□□ 2.33
SSBP4-201ENST00000270061 PPP1R12BO60237 982 aaPredicted RBP29.59■■■□□ 2.33
SSBP4-201ENST00000270061 NBPF12Q5TAG4 269 aaPredicted RBP29.59■■■□□ 2.33
SSBP4-201ENST00000270061 DBNDD2Q9BQY9 259 aa29.59■■■□□ 2.33
SSBP4-201ENST00000270061 TMOD2Q9NZR1 351 aa29.59■■■□□ 2.33
SSBP4-201ENST00000270061 ANGEL1Q9UNK9 670 aaKnown RBP29.59■■■□□ 2.33
SSBP4-201ENST00000270061 SSC5DA1L4H1 1573 aa29.59■■■□□ 2.33
SSBP4-201ENST00000270061 BECN1Q14457 450 aa29.59■■■□□ 2.33
SSBP4-201ENST00000270061 DIXDC1Q155Q3 683 aa29.59■■■□□ 2.33
SSBP4-201ENST00000270061 COL13A1Q5TAT6 717 aaPredicted RBP29.59■■■□□ 2.33
SSBP4-201ENST00000270061 RASAL3Q86YV0 1011 aa29.59■■■□□ 2.33
SSBP4-201ENST00000270061 ABCF2Q9UG63 623 aa29.59■■■□□ 2.33
SSBP4-201ENST00000270061 FZD1Q9UP38 647 aa29.57■■■□□ 2.32
SSBP4-201ENST00000270061 ARID4AP29374 1257 aaPredicted RBP29.57■■■□□ 2.32
SSBP4-201ENST00000270061 CACNB3P54284 484 aa29.57■■■□□ 2.32
SSBP4-201ENST00000270061 KIF2CQ99661 725 aa29.57■■■□□ 2.32
SSBP4-201ENST00000270061 BOLA2Q9H3K6 86 aa29.57■■■□□ 2.32
SSBP4-201ENST00000270061 DAXXQ9UER7 740 aaPredicted RBP29.57■■■□□ 2.32
SSBP4-201ENST00000270061 DAGLAQ9Y4D2 1042 aa29.57■■■□□ 2.32
SSBP4-201ENST00000270061 KIF23Q02241 960 aaPredicted RBP29.56■■■□□ 2.32
SSBP4-201ENST00000270061 SPTY2D1Q68D10 685 aaPredicted RBP29.56■■■□□ 2.32
SSBP4-201ENST00000270061 SPATA5Q8NB90 893 aa29.56■■■□□ 2.32
SSBP4-201ENST00000270061 HMG20BQ9P0W2 317 aa29.56■■■□□ 2.32
SSBP4-201ENST00000270061 UQCRFS1P1P0C7P4 283 aa29.55■■■□□ 2.32
SSBP4-201ENST00000270061 TMEM39BQ9GZU3 492 aa29.55■■■□□ 2.32
SSBP4-201ENST00000270061 HIP1O00291 1037 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 LBX1P52954 281 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 MAP3K11Q16584 847 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 LDLRAD1Q5T700 205 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 FKBP1CQ5VVH2 108 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 DZIP1Q86YF9 867 aaKnown RBP29.54■■■□□ 2.32
SSBP4-201ENST00000270061 CA12O43570 354 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 CCDC158Q5M9N0 1113 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 TEPSINQ96N21 525 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 HAUS7Q99871 368 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 PRDM10Q9NQV6 1147 aa29.54■■■□□ 2.32
SSBP4-201ENST00000270061 SGSM2O43147 1006 aa29.53■■■□□ 2.32
SSBP4-201ENST00000270061 HSPA8P11142 646 aaKnown RBP29.53■■■□□ 2.32
SSBP4-201ENST00000270061 PI16Q6UXB8 463 aa29.53■■■□□ 2.32
SSBP4-201ENST00000270061 FAM83AQ86UY5 434 aa29.53■■■□□ 2.32
SSBP4-201ENST00000270061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.53■■■□□ 2.32
SSBP4-201ENST00000270061 MCAMP43121 646 aa29.52■■■□□ 2.32
SSBP4-201ENST00000270061 TTC39AQ5SRH9 613 aa29.52■■■□□ 2.32
SSBP4-201ENST00000270061 ERICH6Q7L0X2 663 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms