RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 GPSM2P81274 684 aa18.2■□□□□ 0.5
COPS3-201ENST00000268717 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
COPS3-201ENST00000268717 NIM1KQ8IY84 436 aa18.2■□□□□ 0.5
COPS3-201ENST00000268717 RBM46Q8TBY0 533 aaKnown RBP18.2■□□□□ 0.5
COPS3-201ENST00000268717 AGXT2Q9BYV1 514 aa18.2■□□□□ 0.5
COPS3-201ENST00000268717 GGA1Q9UJY5 639 aa18.2■□□□□ 0.5
COPS3-201ENST00000268717 WDR19Q8NEZ3 1342 aa18.2■□□□□ 0.5
COPS3-201ENST00000268717 FRAT2O75474 233 aaPredicted RBP18.2■□□□□ 0.5
COPS3-201ENST00000268717 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
COPS3-201ENST00000268717 TOB2Q14106 344 aaPredicted RBP18.2■□□□□ 0.5
COPS3-201ENST00000268717 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
COPS3-201ENST00000268717 TDRD7Q8NHU6 1098 aaKnown RBP18.2■□□□□ 0.5
COPS3-201ENST00000268717 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
COPS3-201ENST00000268717 ZNF213O14771 459 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 MBD4O95243 580 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 EXOSC10Q01780 885 aaKnown RBP18.19■□□□□ 0.5
COPS3-201ENST00000268717 NOL8Q76FK4 1167 aaKnown RBP18.19■□□□□ 0.5
COPS3-201ENST00000268717 TXNRD3Q86VQ6 643 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 GPC2Q8N158 579 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 WDR66Q8TBY9 1149 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
COPS3-201ENST00000268717 GBP4Q96PP9 640 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 ABCF2Q9UG63 623 aa18.19■□□□□ 0.5
COPS3-201ENST00000268717 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
COPS3-201ENST00000268717 TTLL5Q6EMB2 1281 aa18.18■□□□□ 0.5
COPS3-201ENST00000268717 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
COPS3-201ENST00000268717 C6orf229H3BNL8 230 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 UFL1O94874 794 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 CYP7A1P22680 504 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 MCM4P33991 863 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 COL9A3Q14050 684 aaPredicted RBP18.17■□□□□ 0.5
COPS3-201ENST00000268717 TBC1D16Q8TBP0 767 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 TPCN1Q9ULQ1 816 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 MYH13Q9UKX3 1938 aa18.17■□□□□ 0.5
COPS3-201ENST00000268717 MAST2Q6P0Q8 1798 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 IQCA1LA6NCM1 817 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 IL1R1P14778 569 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 PTMSP20962 102 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 ME3Q16798 604 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 NAA16Q6N069 864 aaPredicted RBP18.16■□□□□ 0.5
COPS3-201ENST00000268717 NSUN4Q96CB9 384 aaKnown RBP18.16■□□□□ 0.5
COPS3-201ENST00000268717 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 GSG1L2A8MUP6 293 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 GIMAP6Q6P9H5 292 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 IFNL3Q8IZI9 196 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 NCOA7Q8NI08 942 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 EYA3Q99504 573 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 RIOK1Q9BRS2 568 aaKnown RBP18.16■□□□□ 0.5
COPS3-201ENST00000268717 ARMT1Q9H993 441 aa18.16■□□□□ 0.5
COPS3-201ENST00000268717 MAGEB6P1A0A0J9YX57 407 aa18.15■□□□□ 0.5
COPS3-201ENST00000268717 LARGE1O95461 756 aa18.15■□□□□ 0.5
COPS3-201ENST00000268717 Q6ZUG5 572 aa18.15■□□□□ 0.5
COPS3-201ENST00000268717 MB21D2Q8IYB1 491 aaPredicted RBP18.15■□□□□ 0.5
COPS3-201ENST00000268717 LCORLQ8N3X6 602 aa18.15■□□□□ 0.5
COPS3-201ENST00000268717 NAPBQ9H115 298 aa18.15■□□□□ 0.5
COPS3-201ENST00000268717 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
COPS3-201ENST00000268717 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
COPS3-201ENST00000268717 CEP350Q5VT06 3117 aa18.14■□□□□ 0.5
COPS3-201ENST00000268717 LAMA4Q16363 1823 aa18.14■□□□□ 0.5
COPS3-201ENST00000268717 BRD1O95696 1058 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 APPP05067 770 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 MCM5P33992 734 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 EVCP57679 992 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 FSTL1Q12841 308 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 SMC1BQ8NDV3 1235 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
COPS3-201ENST00000268717 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.49
COPS3-201ENST00000268717 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 RIMBP2O15034 1052 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 HSPA6P17066 643 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 MECOMQ03112 1051 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 CXCL9Q07325 125 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 TRDNQ13061 729 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 RALYLQ86SE5 291 aaKnown RBP18.13■□□□□ 0.49
COPS3-201ENST00000268717 ADGRA1Q86SQ6 560 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 CCDC83Q8IWF9 413 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 ZNF384Q8TF68 577 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 TAF1DQ9H5J8 278 aaPredicted RBP18.13■□□□□ 0.49
COPS3-201ENST00000268717 CD209Q9NNX6 404 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 HACL1Q9UJ83 578 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 SCN9AQ15858 1988 aa18.13■□□□□ 0.49
COPS3-201ENST00000268717 ST3GAL1Q11201 340 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
COPS3-201ENST00000268717 CERS3Q8IU89 383 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 NBPF3Q9H094 633 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 DBNDD1Q9H9R9 158 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 SCNN1DP51172 638 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 HAND2P61296 217 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 GSTO1P78417 241 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 FGD1P98174 961 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 CIAPIN1Q6FI81 312 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 TBC1D22AQ8WUA7 517 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 GTF3C6Q969F1 213 aa18.12■□□□□ 0.49
COPS3-201ENST00000268717 ZNF274Q96GC6 653 aaPredicted RBP18.12■□□□□ 0.49
COPS3-201ENST00000268717 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms