RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 KLHL10Q6JEL2 608 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 MIGA1Q8NAN2 632 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 CNNM3Q8NE01 707 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 FEZ1Q99689 392 aa19.4■□□□□ 0.7
SQLE-201ENST00000265896 GTPBP4Q9BZE4 634 aaKnown RBP19.4■□□□□ 0.7
SQLE-201ENST00000265896 IRX2Q9BZI1 471 aaPredicted RBP19.4■□□□□ 0.7
SQLE-201ENST00000265896 DHX16O60231 1041 aaKnown RBP19.39■□□□□ 0.7
SQLE-201ENST00000265896 NR5A1Q13285 461 aa19.39■□□□□ 0.7
SQLE-201ENST00000265896 STAMQ92783 540 aa19.39■□□□□ 0.7
SQLE-201ENST00000265896 PRR29P0C7W0 189 aa19.39■□□□□ 0.69
SQLE-201ENST00000265896 BMP6P22004 513 aa19.39■□□□□ 0.69
SQLE-201ENST00000265896 KARSQ15046 597 aaKnown RBP19.39■□□□□ 0.69
SQLE-201ENST00000265896 UTP14CQ5TAP6 766 aaKnown RBP19.39■□□□□ 0.69
SQLE-201ENST00000265896 CARD6Q9BX69 1037 aa19.39■□□□□ 0.69
SQLE-201ENST00000265896 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.69
SQLE-201ENST00000265896 A0A0U1RQJ8 604 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 NEMFO60524 1076 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 TMEM67Q5HYA8 995 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 METTL16Q86W50 562 aaKnown RBP19.38■□□□□ 0.69
SQLE-201ENST00000265896 ATRIPQ8WXE1 791 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 ARMT1Q9H993 441 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 ANGEL1Q9UNK9 670 aaKnown RBP19.38■□□□□ 0.69
SQLE-201ENST00000265896 AFDNP55196 1824 aaKnown RBP19.38■□□□□ 0.69
SQLE-201ENST00000265896 LAMA4Q16363 1823 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 MRC1P22897 1456 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 A0A1W2PQ27 194 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 A0A1W2PQ64 194 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 A0A1W2PQD8 194 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 GOLGA8AA7E2F4 631 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 STX17P56962 302 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 GSDMDP57764 484 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 APOA5Q6Q788 366 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 ERO1AQ96HE7 468 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 C1orf167Q5SNV9 1468 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 CDK11BP21127 795 aaKnown RBP19.38■□□□□ 0.69
SQLE-201ENST00000265896 TACC3Q9Y6A5 838 aa19.38■□□□□ 0.69
SQLE-201ENST00000265896 YEATS4O95619 227 aa19.37■□□□□ 0.69
SQLE-201ENST00000265896 TFRCP02786 760 aaKnown RBP19.37■□□□□ 0.69
SQLE-201ENST00000265896 CMA1P23946 247 aa19.37■□□□□ 0.69
SQLE-201ENST00000265896 IARSP41252 1262 aaKnown RBP19.37■□□□□ 0.69
SQLE-201ENST00000265896 SLC39A14Q15043 492 aa19.37■□□□□ 0.69
SQLE-201ENST00000265896 SLC4A8Q2Y0W8 1093 aa19.37■□□□□ 0.69
SQLE-201ENST00000265896 OSBPL5Q9H0X9 879 aaPredicted RBP19.37■□□□□ 0.69
SQLE-201ENST00000265896 FAM205CA6NFA0 338 aa19.37■□□□□ 0.69
SQLE-201ENST00000265896 IFIT3O14879 490 aaKnown RBP19.37■□□□□ 0.69
SQLE-201ENST00000265896 CLCN6P51797 869 aa19.37■□□□□ 0.69
SQLE-201ENST00000265896 TPM4P67936 248 aa19.37■□□□□ 0.69
SQLE-201ENST00000265896 POLR2DO15514 142 aaKnown RBP19.36■□□□□ 0.69
SQLE-201ENST00000265896 ZBTB43O43298 467 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 SLFN14P0C7P3 912 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 TOP1P11387 765 aaKnown RBP19.36■□□□□ 0.69
SQLE-201ENST00000265896 TCIRG1Q13488 830 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 MTF1Q14872 753 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 SMYD4Q8IYR2 804 aaPredicted RBP19.36■□□□□ 0.69
SQLE-201ENST00000265896 KRT222Q8N1A0 295 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 AIDAQ96BJ3 306 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 ZCCHC17Q9NP64 241 aaKnown RBP19.36■□□□□ 0.69
SQLE-201ENST00000265896 SEC31BQ9NQW1 1179 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 WTIPA6NIX2 430 aaPredicted RBP19.36■□□□□ 0.69
SQLE-201ENST00000265896 FMR1Q06787 632 aaKnown RBP eCLIP19.36■□□□□ 0.693e-7■□□□□ 8.2
SQLE-201ENST00000265896 KCNH3Q9ULD8 1083 aa19.36■□□□□ 0.69
SQLE-201ENST00000265896 MAGEB6Q8N7X4 407 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 CCDC34Q96HJ3 373 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 ZSWIM5Q9P217 1185 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 OXER1Q8TDS5 423 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 INTS13Q9NVM9 706 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 MBD4O95243 580 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 AFMP43652 599 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 TRIM29Q14134 588 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 TOGARAM2Q6ZUX3 1019 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 WDR24Q96S15 920 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 SAMSN1Q9NSI8 373 aaKnown RBP19.35■□□□□ 0.69
SQLE-201ENST00000265896 TRMT112Q9UI30 125 aaKnown RBP19.35■□□□□ 0.69
SQLE-201ENST00000265896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.35■□□□□ 0.69
SQLE-201ENST00000265896 OVOS2A0A0G2JMS6 1433 aa19.35■□□□□ 0.69
SQLE-201ENST00000265896 UBN2Q6ZU65 1347 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 GYS2P54840 703 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 MYL5Q02045 173 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 BRAPQ7Z569 592 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 MNS1Q8NEH6 495 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 AKAP2Q9Y2D5 859 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 GNG11P61952 73 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 GPR108Q9NPR9 543 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 SERTAD1Q9UHV2 236 aa19.34■□□□□ 0.69
SQLE-201ENST00000265896 MORC2Q9Y6X9 1032 aaPredicted RBP19.34■□□□□ 0.69
SQLE-201ENST00000265896 SH2B2O14492 632 aaPredicted RBP19.33■□□□□ 0.69
SQLE-201ENST00000265896 PRDM1O75626 825 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 PDE6AP16499 860 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 HSPA2P54652 639 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 EVA1CP58658 441 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 PTPAQ15257 358 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 CCDC102BQ68D86 513 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 CCDC150Q8NCX0 1101 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 PCDHB6Q9Y5E3 794 aa19.33■□□□□ 0.69
SQLE-201ENST00000265896 TMEM94Q12767 1356 aa19.33■□□□□ 0.68
SQLE-201ENST00000265896 ADD2P35612 726 aa19.33■□□□□ 0.68
SQLE-201ENST00000265896 TEX35Q5T0J7 233 aa19.33■□□□□ 0.68
SQLE-201ENST00000265896 ATL3Q6DD88 541 aa19.33■□□□□ 0.68
SQLE-201ENST00000265896 OLFM4Q6UX06 510 aa19.33■□□□□ 0.68
SQLE-201ENST00000265896 UBXN4Q92575 508 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms