RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ZMYND15Q9H091 742 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 PROSER3Q2NL68 480 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 A0A0D9SFI3 127 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 E7EWF7 191 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 IFFO1Q0D2I5 559 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 BICDL2A1A5D9 508 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 JAK2O60674 1132 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 KRT13P13646 458 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 MYL5Q02045 173 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 HECW2Q9P2P5 1572 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 GTPBP4Q9BZE4 634 aaKnown RBP15.85■□□□□ 0.13
CDH3-201ENST00000264012 CCDC113Q9H0I3 377 aa15.85■□□□□ 0.13
CDH3-201ENST00000264012 ZRSR2Q15696 482 aaKnown RBP15.85■□□□□ 0.13
CDH3-201ENST00000264012 LEO1Q8WVC0 666 aaPredicted RBP15.85■□□□□ 0.13
CDH3-201ENST00000264012 RPS8P62241 208 aaKnown RBP15.84■□□□□ 0.13
CDH3-201ENST00000264012 RBSNQ9H1K0 784 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 GOPCQ9HD26 462 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 GPCPD1Q9NPB8 672 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
CDH3-201ENST00000264012 MRPL12P52815 198 aaKnown RBP15.84■□□□□ 0.13
CDH3-201ENST00000264012 PTH1RQ03431 593 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 IFI16Q16666 785 aaKnown RBP15.84■□□□□ 0.13
CDH3-201ENST00000264012 CDC37L1Q7L3B6 337 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 USP37Q86T82 979 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 ZBTB38Q8NAP3 1195 aaPredicted RBP15.84■□□□□ 0.13
CDH3-201ENST00000264012 PHKBQ93100 1093 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
CDH3-201ENST00000264012 KCNH3Q9ULD8 1083 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 CCDC175P0C221 793 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 POLD1P28340 1107 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 TBC1D5Q92609 795 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 GOLGA6L7A0A1B0GV03 622 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
CDH3-201ENST00000264012 PIK3AP1Q6ZUJ8 805 aa15.84■□□□□ 0.13
CDH3-201ENST00000264012 POLR3GO15318 223 aaPredicted RBP15.83■□□□□ 0.13
CDH3-201ENST00000264012 USP21Q9UK80 565 aa15.83■□□□□ 0.13
CDH3-201ENST00000264012 PALD1Q9ULE6 856 aa15.83■□□□□ 0.13
CDH3-201ENST00000264012 ZNF853P0CG23 659 aa15.83■□□□□ 0.12
CDH3-201ENST00000264012 ME3Q16798 604 aa15.83■□□□□ 0.12
CDH3-201ENST00000264012 CERS3Q8IU89 383 aa15.83■□□□□ 0.12
CDH3-201ENST00000264012 NPHP4O75161 1426 aaPredicted RBP15.83■□□□□ 0.12
CDH3-201ENST00000264012 EIF6P56537 245 aaKnown RBP15.83■□□□□ 0.12
CDH3-201ENST00000264012 UBXN1Q04323 297 aa15.83■□□□□ 0.12
CDH3-201ENST00000264012 KRT40Q6A162 431 aa15.83■□□□□ 0.12
CDH3-201ENST00000264012 CLSTN2Q9H4D0 955 aa15.83■□□□□ 0.12
CDH3-201ENST00000264012 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
CDH3-201ENST00000264012 CTNNA2P26232 953 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 PPP2R5BQ15173 497 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 LRRC24Q50LG9 513 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 SPECC1Q5M775 1068 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
CDH3-201ENST00000264012 DYDC1Q8WWB3 177 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 COPRSQ9NQ92 184 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 KIF1BO60333 1816 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 FAM13AO94988 1023 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 BRD1O95696 1058 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 DPP8Q6V1X1 898 aaPredicted RBP15.82■□□□□ 0.12
CDH3-201ENST00000264012 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
CDH3-201ENST00000264012 HS2ST1Q7LGA3 356 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 HAUS7Q99871 368 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 TAOK3Q9H2K8 898 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 AKNAD1Q5T1N1 836 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 DRC1Q96MC2 740 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
CDH3-201ENST00000264012 CHD1O14646 1710 aa15.82■□□□□ 0.12
CDH3-201ENST00000264012 MAST3O60307 1309 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 PLCD1P51178 756 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 ABCC3O15438 1527 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 GADD45BO75293 160 aaPredicted RBP15.81■□□□□ 0.12
CDH3-201ENST00000264012 CCDC42Q96M95 316 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 LMBRD1Q9NUN5 540 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 CTAGE15A4D2H0 777 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 CUTAO60888 179 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 CTAGE8P0CG41 777 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 CKAP4Q07065 602 aaKnown RBP15.81■□□□□ 0.12
CDH3-201ENST00000264012 PLS1Q14651 629 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 CTAGE6Q86UF2 777 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 CTAGE4Q8IX94 777 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 GTF3C6Q969F1 213 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
CDH3-201ENST00000264012 CARD10Q9BWT7 1032 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 STAP2Q9UGK3 403 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 SHROOM2Q13796 1616 aa15.81■□□□□ 0.12
CDH3-201ENST00000264012 TUBB4AP04350 444 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 ARID5AQ03989 594 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 STK32BQ9NY57 414 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 KRT83P78385 493 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 SV2BQ7L1I2 683 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
CDH3-201ENST00000264012 SHTN1A0MZ66 631 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 TTC38Q5R3I4 469 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 MAPKAPK5Q8IW41 473 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 FERMT2Q96AC1 680 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 SH2D4AQ9H788 454 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 MAP3K15Q6ZN16 1313 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 TACC1O75410 805 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 KIF5AQ12840 1032 aa15.8■□□□□ 0.12
CDH3-201ENST00000264012 BMS1Q14692 1282 aaKnown RBP15.8■□□□□ 0.12
CDH3-201ENST00000264012 ASAP1Q9ULH1 1129 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms