RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MAP3K9P80192 1104 aa19.82■□□□□ 0.76
USE1-201ENST00000263897 OS9Q13438 667 aaPredicted RBP19.82■□□□□ 0.76
USE1-201ENST00000263897 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.82■□□□□ 0.76
USE1-201ENST00000263897 FAM151AQ8WW52 585 aa19.82■□□□□ 0.76
USE1-201ENST00000263897 HOOK2Q96ED9 719 aa19.82■□□□□ 0.76
USE1-201ENST00000263897 USP40Q9NVE5 1235 aa19.82■□□□□ 0.76
USE1-201ENST00000263897 HMG20BQ9P0W2 317 aa19.82■□□□□ 0.76
USE1-201ENST00000263897 SPATA5Q8NB90 893 aa19.81■□□□□ 0.76
USE1-201ENST00000263897 FAM163AQ96GL9 167 aaPredicted RBP19.81■□□□□ 0.76
USE1-201ENST00000263897 MCOLN1Q9GZU1 580 aa19.81■□□□□ 0.76
USE1-201ENST00000263897 ELP3Q9H9T3 547 aa19.81■□□□□ 0.76
USE1-201ENST00000263897 MYH2Q9UKX2 1941 aa19.8■□□□□ 0.76
USE1-201ENST00000263897 ARID4AP29374 1257 aaPredicted RBP19.8■□□□□ 0.76
USE1-201ENST00000263897 GJA5P36382 358 aa19.8■□□□□ 0.76
USE1-201ENST00000263897 DGKZQ13574 1117 aa19.8■□□□□ 0.76
USE1-201ENST00000263897 TNNI3KQ59H18 835 aa19.8■□□□□ 0.76
USE1-201ENST00000263897 SLF2Q8IX21 1173 aa19.8■□□□□ 0.76
USE1-201ENST00000263897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.8■□□□□ 0.76
USE1-201ENST00000263897 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
USE1-201ENST00000263897 FPGT-TNNI3KV9GXZ4 949 aa19.8■□□□□ 0.76
USE1-201ENST00000263897 GAKO14976 1311 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 ALDH1A1P00352 501 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 UQCRFS1P1P0C7P4 283 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 TCP10Q12799 353 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 NFIAQ12857 509 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 CEP85Q6P2H3 762 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 PI16Q6UXB8 463 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 ERICH6Q7L0X2 663 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 DZIP1Q86YF9 867 aaKnown RBP19.79■□□□□ 0.76
USE1-201ENST00000263897 IFNL1Q8IU54 200 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 CFHR5Q9BXR6 569 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 FAM198AQ9UFP1 575 aa19.79■□□□□ 0.76
USE1-201ENST00000263897 RPAP1Q9BWH6 1393 aaPredicted RBP19.79■□□□□ 0.76
USE1-201ENST00000263897 MECOMQ03112 1051 aa19.78■□□□□ 0.76
USE1-201ENST00000263897 VGLL4Q14135 290 aa19.78■□□□□ 0.76
USE1-201ENST00000263897 NOM1Q5C9Z4 860 aaKnown RBP19.78■□□□□ 0.76
USE1-201ENST00000263897 DCAF15Q66K64 600 aa19.78■□□□□ 0.76
USE1-201ENST00000263897 TBC1D9Q6ZT07 1266 aa19.78■□□□□ 0.76
USE1-201ENST00000263897 OPTNQ96CV9 577 aa19.78■□□□□ 0.76
USE1-201ENST00000263897 CSADQ9Y600 493 aa19.78■□□□□ 0.76
USE1-201ENST00000263897 AK9Q5TCS8 1911 aa19.78■□□□□ 0.76
USE1-201ENST00000263897 OTOFQ9HC10 1997 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 TESPA1A2RU30 521 aaPredicted RBP19.77■□□□□ 0.76
USE1-201ENST00000263897 GPR25O00155 361 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 MCAMP43121 646 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 CCDC158Q5M9N0 1113 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 MIGA2Q7L4E1 593 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 DBNDD2Q9BQY9 259 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 IDI2Q9BXS1 227 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 R3HDMLQ9H3Y0 253 aa19.77■□□□□ 0.76
USE1-201ENST00000263897 IGF2BP3O00425 579 aaKnown RBP eCLIP19.76■□□□□ 0.75
USE1-201ENST00000263897 ZFPM1Q8IX07 1006 aa19.76■□□□□ 0.75
USE1-201ENST00000263897 ZNF384Q8TF68 577 aa19.76■□□□□ 0.75
USE1-201ENST00000263897 ZNF296Q8WUU4 475 aaPredicted RBP19.76■□□□□ 0.75
USE1-201ENST00000263897 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
USE1-201ENST00000263897 WRNIP1Q96S55 665 aa19.76■□□□□ 0.75
USE1-201ENST00000263897 DDX19BQ9UMR2 479 aa19.76■□□□□ 0.75
USE1-201ENST00000263897 COG6Q9Y2V7 657 aa19.76■□□□□ 0.75
USE1-201ENST00000263897 GPR75-ASB3A0A0A6YYF3 556 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 ENTPD3O75355 529 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 LDHCP07864 332 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 TTC39AQ5SRH9 613 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 OTUD7BQ6GQQ9 843 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 ZKSCAN4Q969J2 545 aaPredicted RBP19.75■□□□□ 0.75
USE1-201ENST00000263897 NSUN4Q96CB9 384 aaKnown RBP19.75■□□□□ 0.75
USE1-201ENST00000263897 MS4A4AQ96JQ5 239 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 ZNF512BQ96KM6 892 aaPredicted RBP19.75■□□□□ 0.75
USE1-201ENST00000263897 PTPN18Q99952 460 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 ZNF341Q9BYN7 854 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 LAMB1P07942 1786 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 MROH7-TTC4A0A0A0MT08 1334 aa19.75■□□□□ 0.75
USE1-201ENST00000263897 BTDP43251 543 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 RGS3P49796 1198 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 GSTO1P78417 241 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 CTU1Q7Z7A3 348 aaKnown RBP19.74■□□□□ 0.75
USE1-201ENST00000263897 ERO1BQ86YB8 467 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 RPAP2Q8IXW5 612 aaPredicted RBP19.74■□□□□ 0.75
USE1-201ENST00000263897 EAF2Q96CJ1 260 aaPredicted RBP19.74■□□□□ 0.75
USE1-201ENST00000263897 SNRKQ9NRH2 765 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 ZBTB40Q9NUA8 1239 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 RAI14Q9P0K7 980 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 LRP2BPQ9P2M1 347 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 ZNF112Q9UJU3 913 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
USE1-201ENST00000263897 SPDYE5A6NIY4 337 aa19.73■□□□□ 0.75
USE1-201ENST00000263897 CCDC85CA6NKD9 419 aa19.73■□□□□ 0.75
USE1-201ENST00000263897 GTF2A2P52657 109 aa19.73■□□□□ 0.75
USE1-201ENST00000263897 OTUD5Q96G74 571 aa19.73■□□□□ 0.75
USE1-201ENST00000263897 CCDC8Q9H0W5 538 aaPredicted RBP19.73■□□□□ 0.75
USE1-201ENST00000263897 EXOC6BQ9Y2D4 811 aa19.73■□□□□ 0.75
USE1-201ENST00000263897 FKTNO75072 461 aa19.72■□□□□ 0.75
USE1-201ENST00000263897 WDHD1O75717 1129 aaPredicted RBP19.72■□□□□ 0.75
USE1-201ENST00000263897 INPP5BP32019 993 aa19.72■□□□□ 0.75
USE1-201ENST00000263897 RHBDL3P58872 404 aa19.72■□□□□ 0.75
USE1-201ENST00000263897 ERC1Q8IUD2 1116 aa19.72■□□□□ 0.75
USE1-201ENST00000263897 CHMP4BQ9H444 224 aaKnown RBP19.72■□□□□ 0.75
USE1-201ENST00000263897 DBNLQ9UJU6 430 aaKnown RBP19.72■□□□□ 0.75
USE1-201ENST00000263897 MAP4K4O95819 1239 aaPredicted RBP19.71■□□□□ 0.75
USE1-201ENST00000263897 HSP90AB4PQ58FF6 505 aa19.71■□□□□ 0.75
USE1-201ENST00000263897 SH3BP5LQ7L8J4 393 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms