RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 UPF2Q9HAU5 1272 aaKnown RBP11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 PALD1Q9ULE6 856 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 DICER1Q9UPY3 1922 aaKnown RBP11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 MROH7-TTC4A0A0A0MT08 1334 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 ZNF541Q9H0D2 1346 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 SHTN1A0MZ66 631 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 FZD9O00144 591 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 APPP05067 770 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 LMNB1P20700 586 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 GSTO1P78417 241 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 CIAPIN1Q6FI81 312 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 SH3RF3Q8TEJ3 882 aaPredicted RBP11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 SDR42E1Q8WUS8 393 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 GMLQ99445 158 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 GJA3Q9Y6H8 435 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 TAF6LQ9Y6J9 622 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 SLC4A4Q9Y6R1 1079 aa11.67□□□□□ -0.54
SNRNP40-201ENST00000263694 GSG1L2A8MUP6 293 aa11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 LDHCP07864 332 aa11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 BTDP43251 543 aa11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 FKBP1AP62942 108 aaKnown RBP11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 EPB41L4AQ9HCS5 686 aaPredicted RBP11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 RNF181Q9P0P0 153 aa11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 BAZ2AQ9UIF9 1905 aaKnown RBP11.66□□□□□ -0.54
SNRNP40-201ENST00000263694 FGAP02671 866 aa11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 CRKP46108 304 aa11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 RBM5P52756 815 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 NECTIN1Q15223 517 aa11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 KIF2CQ99661 725 aa11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 DSCC1Q9BVC3 393 aa11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 CDK5RAP2Q96SN8 1893 aa11.65□□□□□ -0.54
SNRNP40-201ENST00000263694 GAKO14976 1311 aa11.65□□□□□ -0.55
SNRNP40-201ENST00000263694 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 SMIM22K7EJ46 135 aa11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 HSPA4P34932 840 aa11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 RBM25P49756 843 aaKnown RBP11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 TNIP1Q15025 636 aa11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 TEKT1Q969V4 418 aa11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
SNRNP40-201ENST00000263694 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 SLC27A2O14975 620 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 GMPSP49915 693 aaPredicted RBP11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 RHBDL3P58872 404 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 PPP4CP60510 307 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 HAND2P61296 217 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 SLC4A8Q2Y0W8 1093 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 CFAP100Q494V2 611 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 APOBEC3HQ6NTF7 200 aaKnown RBP11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 HHIPL2Q6UWX4 724 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 TGFBRAP1Q8WUH2 860 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 NOL10Q9BSC4 688 aaKnown RBP11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 SNX14Q9Y5W7 946 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 TIAM2Q8IVF5 1701 aa11.63□□□□□ -0.55
SNRNP40-201ENST00000263694 BAG3O95817 575 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 CYP21A2P08686 494 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 CLCN6P51797 869 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 CACNB3P54284 484 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 ADCK5Q3MIX3 580 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 AGBL3Q8NEM8 1001 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 PRMT6Q96LA8 375 aaPredicted RBP11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 CRNKL1Q9BZJ0 848 aaKnown RBP11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 MYO3BQ8WXR4 1341 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 IGSF3O75054 1194 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 EGFRP00533 1210 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 CPA1P15085 419 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 GNAT2P19087 354 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 MCCP23508 829 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 TDO2P48775 406 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 MAPKAPK5Q8IW41 473 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 TEX11Q8IYF3 940 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 ZDHHC15Q96MV8 337 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 INCENPQ9NQS7 918 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 SERPINA10Q9UK55 444 aa11.62□□□□□ -0.55
SNRNP40-201ENST00000263694 ECM29Q5VYK3 1845 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 EPB41L2O43491 1005 aaKnown RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 DDNO94850 711 aaPredicted RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 CYP2D6P10635 497 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms