RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 LRRC37AA6NMS7 1700 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 CTDNEP1O95476 244 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 SP8Q8IXZ3 490 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 TBC1D16Q8TBP0 767 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 WDR66Q8TBY9 1149 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 LLPHQ9BRT6 129 aaKnown RBP18.62■□□□□ 0.57
VPS26A-201ENST00000263559 TIAM2Q8IVF5 1701 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 SLC15A2Q16348 729 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 AKNAD1Q5T1N1 836 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 SPTY2D1Q68D10 685 aaPredicted RBP18.62■□□□□ 0.57
VPS26A-201ENST00000263559 NSUN7Q8NE18 718 aaKnown RBP18.62■□□□□ 0.57
VPS26A-201ENST00000263559 SALL1Q9NSC2 1324 aa18.62■□□□□ 0.57
VPS26A-201ENST00000263559 BAZ2AQ9UIF9 1905 aaKnown RBP18.62■□□□□ 0.57
VPS26A-201ENST00000263559 PDIA4P13667 645 aaKnown RBP18.61■□□□□ 0.57
VPS26A-201ENST00000263559 NPR1P16066 1061 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 KLHL40Q2TBA0 621 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 TMC4Q7Z404 712 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 FBXO41Q8TF61 875 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 DDX11Q96FC9 970 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 CD209Q9NNX6 404 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 LTBP1Q14766 1721 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 KLF18A0A0U1RQI7 1052 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 PDE6BP35913 854 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 MFSD6Q6ZSS7 791 aa18.61■□□□□ 0.57
VPS26A-201ENST00000263559 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.57
VPS26A-201ENST00000263559 CDC37L1Q7L3B6 337 aa18.6■□□□□ 0.57
VPS26A-201ENST00000263559 STAG1Q8WVM7 1258 aa18.6■□□□□ 0.57
VPS26A-201ENST00000263559 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
VPS26A-201ENST00000263559 C6orf229H3BNL8 230 aa18.6■□□□□ 0.57
VPS26A-201ENST00000263559 PPARAQ07869 468 aa18.6■□□□□ 0.57
VPS26A-201ENST00000263559 DZIP1Q86YF9 867 aaKnown RBP18.6■□□□□ 0.57
VPS26A-201ENST00000263559 STK11IPQ8N1F8 1099 aa18.6■□□□□ 0.57
VPS26A-201ENST00000263559 ZSWIM5Q9P217 1185 aa18.6■□□□□ 0.57
VPS26A-201ENST00000263559 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
VPS26A-201ENST00000263559 MINDY4BA8MYZ0 360 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 KDM4AO75164 1064 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 LDHBP07195 334 aaKnown RBP18.59■□□□□ 0.57
VPS26A-201ENST00000263559 IL1R1P14778 569 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 CNNM2Q9H8M5 875 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 ANGEL1Q9UNK9 670 aaKnown RBP18.59■□□□□ 0.57
VPS26A-201ENST00000263559 ATP6V1DQ9Y5K8 247 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 SH2B2O14492 632 aaPredicted RBP18.59■□□□□ 0.57
VPS26A-201ENST00000263559 ALDH1B1P30837 517 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 GRIK5Q16478 980 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 KRT23Q9C075 422 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 HPS5Q9UPZ3 1129 aa18.59■□□□□ 0.57
VPS26A-201ENST00000263559 PTPDC1A2A3K4 754 aa18.58■□□□□ 0.57
VPS26A-201ENST00000263559 TMED8Q6PL24 325 aaPredicted RBP18.58■□□□□ 0.57
VPS26A-201ENST00000263559 IGDCC4Q8TDY8 1250 aa18.58■□□□□ 0.57
VPS26A-201ENST00000263559 TMEM87BQ96K49 555 aa18.58■□□□□ 0.57
VPS26A-201ENST00000263559 KIAA1551Q9HCM1 1747 aa18.58■□□□□ 0.57
VPS26A-201ENST00000263559 GOLGA8BA8MQT2 603 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 SMIM22K7EJ46 135 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 RRP12Q5JTH9 1297 aaKnown RBP18.58■□□□□ 0.56
VPS26A-201ENST00000263559 OLFM4Q6UX06 510 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 RAB11FIP4Q86YS3 637 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 FAM184AQ8NB25 1140 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 GPT2Q8TD30 523 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 STK32BQ9NY57 414 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 ANAPC4Q9UJX5 808 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.56
VPS26A-201ENST00000263559 MASTLQ96GX5 879 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 SENP2Q9HC62 589 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 PPFIA3O75145 1194 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 NCLP19338 710 aaKnown RBP18.57■□□□□ 0.56
VPS26A-201ENST00000263559 HMGN5P82970 282 aaKnown RBP18.57■□□□□ 0.56
VPS26A-201ENST00000263559 USP48Q86UV5 1035 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 FERMT3Q86UX7 667 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 CHMP4CQ96CF2 233 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
VPS26A-201ENST00000263559 CRNKL1Q9BZJ0 848 aaKnown RBP18.57■□□□□ 0.56
VPS26A-201ENST00000263559 RNF41Q9H4P4 317 aaPredicted RBP18.57■□□□□ 0.56
VPS26A-201ENST00000263559 CYP2D7A0A087X1C5 515 aa18.56■□□□□ 0.56
VPS26A-201ENST00000263559 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
VPS26A-201ENST00000263559 LY9Q9HBG7 655 aa18.56■□□□□ 0.56
VPS26A-201ENST00000263559 IGSF3O75054 1194 aa18.56■□□□□ 0.56
VPS26A-201ENST00000263559 DNM1Q05193 864 aaKnown RBP18.56■□□□□ 0.56
VPS26A-201ENST00000263559 TMEM67Q5HYA8 995 aa18.56■□□□□ 0.56
VPS26A-201ENST00000263559 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
VPS26A-201ENST00000263559 DIXDC1Q155Q3 683 aa18.55■□□□□ 0.56
VPS26A-201ENST00000263559 MPNDQ8N594 471 aa18.55■□□□□ 0.56
VPS26A-201ENST00000263559 ZNF622Q969S3 477 aaKnown RBP eCLIP18.55■□□□□ 0.56
VPS26A-201ENST00000263559 DCP1AQ9NPI6 582 aaPredicted RBP18.55■□□□□ 0.56
VPS26A-201ENST00000263559 MYH2Q9UKX2 1941 aa18.55■□□□□ 0.56
VPS26A-201ENST00000263559 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
VPS26A-201ENST00000263559 USP17L21D6R901 530 aa18.55■□□□□ 0.56
VPS26A-201ENST00000263559 IFIT3O14879 490 aaKnown RBP18.55■□□□□ 0.56
VPS26A-201ENST00000263559 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
VPS26A-201ENST00000263559 FDPSP14324 419 aaKnown RBP18.54■□□□□ 0.56
VPS26A-201ENST00000263559 APOA5Q6Q788 366 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 SGMS1Q86VZ5 419 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 C2CD5Q86YS7 1000 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 TMEM87AQ8NBN3 555 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 H3BQV1 296 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 GADD45BO75293 160 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms