RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 RASAL3Q86YV0 1011 aa22.6■■□□□ 1.21
COPE-201ENST00000262812 TEPSINQ96N21 525 aa22.6■■□□□ 1.21
COPE-201ENST00000262812 RAI14Q9P0K7 980 aa22.6■■□□□ 1.21
COPE-201ENST00000262812 USP2O75604 605 aaPredicted RBP22.59■■□□□ 1.21
COPE-201ENST00000262812 LDLRAD1Q5T700 205 aa22.59■■□□□ 1.21
COPE-201ENST00000262812 SLF2Q8IX21 1173 aa22.59■■□□□ 1.21
COPE-201ENST00000262812 LRP2BPQ9P2M1 347 aa22.59■■□□□ 1.21
COPE-201ENST00000262812 ARAP2Q8WZ64 1704 aa22.58■■□□□ 1.21
COPE-201ENST00000262812 CTCFP49711 727 aaPredicted RBP22.58■■□□□ 1.21
COPE-201ENST00000262812 TCP10Q12799 353 aa22.58■■□□□ 1.21
COPE-201ENST00000262812 COL13A1Q5TAT6 717 aaPredicted RBP22.58■■□□□ 1.21
COPE-201ENST00000262812 KIF1BPQ96EK5 621 aa22.58■■□□□ 1.21
COPE-201ENST00000262812 TSKSQ9UJT2 592 aa22.58■■□□□ 1.21
COPE-201ENST00000262812 PAPPA2Q9BXP8 1791 aa22.58■■□□□ 1.2
COPE-201ENST00000262812 RAB11FIP3O75154 756 aa22.57■■□□□ 1.2
COPE-201ENST00000262812 ZAP70P43403 619 aa22.57■■□□□ 1.2
COPE-201ENST00000262812 IREB2P48200 963 aaKnown RBP22.57■■□□□ 1.2
COPE-201ENST00000262812 LBX1P52954 281 aa22.57■■□□□ 1.2
COPE-201ENST00000262812 SLC10A4Q96EP9 437 aa22.57■■□□□ 1.2
COPE-201ENST00000262812 SSC5DA1L4H1 1573 aa22.57■■□□□ 1.2
COPE-201ENST00000262812 NFIAQ12857 509 aa22.56■■□□□ 1.2
COPE-201ENST00000262812 FKBP1CQ5VVH2 108 aa22.56■■□□□ 1.2
COPE-201ENST00000262812 FAM83AQ86UY5 434 aa22.56■■□□□ 1.2
COPE-201ENST00000262812 CLASRPQ8N2M8 674 aaKnown RBP22.56■■□□□ 1.2
COPE-201ENST00000262812 ZNF384Q8TF68 577 aa22.56■■□□□ 1.2
COPE-201ENST00000262812 CLMNQ96JQ2 1002 aa22.56■■□□□ 1.2
COPE-201ENST00000262812 ZNF512BQ96KM6 892 aaPredicted RBP22.56■■□□□ 1.2
COPE-201ENST00000262812 CYP2E1P05181 493 aaPredicted RBP22.55■■□□□ 1.2
COPE-201ENST00000262812 BTDP43251 543 aa22.55■■□□□ 1.2
COPE-201ENST00000262812 GSTO1P78417 241 aa22.55■■□□□ 1.2
COPE-201ENST00000262812 MAP3K11Q16584 847 aa22.55■■□□□ 1.2
COPE-201ENST00000262812 NSUN4Q96CB9 384 aaKnown RBP22.55■■□□□ 1.2
COPE-201ENST00000262812 FAM163AQ96GL9 167 aaPredicted RBP22.55■■□□□ 1.2
COPE-201ENST00000262812 CSRNP1Q96S65 589 aa22.55■■□□□ 1.2
COPE-201ENST00000262812 NDUFB9Q9Y6M9 179 aa22.55■■□□□ 1.2
COPE-201ENST00000262812 GAKO14976 1311 aa22.55■■□□□ 1.2
COPE-201ENST00000262812 LDHCP07864 332 aa22.54■■□□□ 1.2
COPE-201ENST00000262812 IFIT2P09913 472 aaKnown RBP22.54■■□□□ 1.2
COPE-201ENST00000262812 HSPA8P11142 646 aaKnown RBP22.54■■□□□ 1.2
COPE-201ENST00000262812 ZFPM1Q8IX07 1006 aa22.54■■□□□ 1.2
COPE-201ENST00000262812 FAM151AQ8WW52 585 aa22.54■■□□□ 1.2
COPE-201ENST00000262812 PIH1D3Q9NQM4 214 aaKnown RBP22.54■■□□□ 1.2
COPE-201ENST00000262812 MROH7-TTC4A0A0A0MT08 1334 aa22.54■■□□□ 1.2
COPE-201ENST00000262812 MIGA2Q7L4E1 593 aa22.53■■□□□ 1.2
COPE-201ENST00000262812 CRBNQ96SW2 442 aa22.53■■□□□ 1.2
COPE-201ENST00000262812 FAM198AQ9UFP1 575 aa22.53■■□□□ 1.2
COPE-201ENST00000262812 MYH13Q9UKX3 1938 aa22.53■■□□□ 1.2
COPE-201ENST00000262812 GPR75-ASB3A0A0A6YYF3 556 aa22.52■■□□□ 1.2
COPE-201ENST00000262812 ANKRD13AQ8IZ07 590 aa22.52■■□□□ 1.2
COPE-201ENST00000262812 SMARCA5O60264 1052 aaPredicted RBP22.51■■□□□ 1.19
COPE-201ENST00000262812 RGS3P49796 1198 aa22.51■■□□□ 1.19
COPE-201ENST00000262812 PICALMQ13492 652 aa22.51■■□□□ 1.19
COPE-201ENST00000262812 SPRYD7Q5W111 196 aa22.51■■□□□ 1.19
COPE-201ENST00000262812 NAA16Q6N069 864 aaPredicted RBP22.51■■□□□ 1.19
COPE-201ENST00000262812 ELP3Q9H9T3 547 aa22.51■■□□□ 1.19
COPE-201ENST00000262812 PCDHB15Q9Y5E8 787 aa22.51■■□□□ 1.19
COPE-201ENST00000262812 ECM29Q5VYK3 1845 aa22.51■■□□□ 1.19
COPE-201ENST00000262812 TRPA1O75762 1119 aa22.5■■□□□ 1.19
COPE-201ENST00000262812 MAP3K9P80192 1104 aa22.5■■□□□ 1.19
COPE-201ENST00000262812 HOOK2Q96ED9 719 aa22.5■■□□□ 1.19
COPE-201ENST00000262812 RNF186Q9NXI6 227 aa22.5■■□□□ 1.19
COPE-201ENST00000262812 CA12O43570 354 aa22.49■■□□□ 1.19
COPE-201ENST00000262812 ZSCAN29Q8IWY8 852 aaPredicted RBP22.49■■□□□ 1.19
COPE-201ENST00000262812 WNK4Q96J92 1243 aa22.49■■□□□ 1.19
COPE-201ENST00000262812 NOL10Q9BSC4 688 aaKnown RBP22.49■■□□□ 1.19
COPE-201ENST00000262812 IDI2Q9BXS1 227 aa22.49■■□□□ 1.19
COPE-201ENST00000262812 LRRCC1Q9C099 1032 aa22.49■■□□□ 1.19
COPE-201ENST00000262812 ANTXR1Q9H6X2 564 aa22.49■■□□□ 1.19
COPE-201ENST00000262812 DDX4Q9NQI0 724 aaKnown RBP22.49■■□□□ 1.19
COPE-201ENST00000262812 PRDM10Q9NQV6 1147 aa22.49■■□□□ 1.19
COPE-201ENST00000262812 THSD7BQ9C0I4 1608 aa22.49■■□□□ 1.19
COPE-201ENST00000262812 UNCXA6NJT0 531 aa22.48■■□□□ 1.19
COPE-201ENST00000262812 WDHD1O75717 1129 aaPredicted RBP22.48■■□□□ 1.19
COPE-201ENST00000262812 IDH1O75874 414 aaKnown RBP22.48■■□□□ 1.19
COPE-201ENST00000262812 RHBDL3P58872 404 aa22.48■■□□□ 1.19
COPE-201ENST00000262812 DCAF15Q66K64 600 aa22.48■■□□□ 1.19
COPE-201ENST00000262812 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.48■■□□□ 1.19
COPE-201ENST00000262812 REM2Q8IYK8 340 aaPredicted RBP22.48■■□□□ 1.19
COPE-201ENST00000262812 DCTPP1Q9H773 170 aa22.48■■□□□ 1.19
COPE-201ENST00000262812 ENTPD3O75355 529 aa22.47■■□□□ 1.19
COPE-201ENST00000262812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.47■■□□□ 1.195e-12■□□□□ 8.3
COPE-201ENST00000262812 ZKSCAN4Q969J2 545 aaPredicted RBP22.47■■□□□ 1.19
COPE-201ENST00000262812 WRNIP1Q96S55 665 aa22.47■■□□□ 1.19
COPE-201ENST00000262812 AATFQ9NY61 560 aaKnown RBP eCLIP22.47■■□□□ 1.19
COPE-201ENST00000262812 CSADQ9Y600 493 aa22.47■■□□□ 1.19
COPE-201ENST00000262812 CYP7A1P22680 504 aa22.46■■□□□ 1.19
COPE-201ENST00000262812 VGLL4Q14135 290 aa22.46■■□□□ 1.19
COPE-201ENST00000262812 ADGRA1Q86SQ6 560 aa22.46■■□□□ 1.19
COPE-201ENST00000262812 SH3RF3Q8TEJ3 882 aaPredicted RBP22.46■■□□□ 1.19
COPE-201ENST00000262812 CNKSR2Q8WXI2 1034 aa22.46■■□□□ 1.19
COPE-201ENST00000262812 OPTNQ96CV9 577 aa22.46■■□□□ 1.19
COPE-201ENST00000262812 DNAJC2Q99543 621 aaKnown RBP22.46■■□□□ 1.19
COPE-201ENST00000262812 ZNF341Q9BYN7 854 aa22.46■■□□□ 1.19
COPE-201ENST00000262812 BAG3O95817 575 aa22.45■■□□□ 1.18
COPE-201ENST00000262812 GJA5P36382 358 aa22.45■■□□□ 1.18
COPE-201ENST00000262812 TM4SF4P48230 202 aa22.45■■□□□ 1.18
COPE-201ENST00000262812 SH3BP5LQ7L8J4 393 aa22.45■■□□□ 1.18
COPE-201ENST00000262812 TEX11Q8IYF3 940 aa22.45■■□□□ 1.18
COPE-201ENST00000262812 TNS4Q8IZW8 715 aa22.45■■□□□ 1.18
COPE-201ENST00000262812 DDTLA6NHG4 134 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms