RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ANKIB1Q9P2G1 1089 aa15.94■□□□□ 0.14
VMP1-201ENST00000262291 ZNF804BA4D1E1 1349 aa15.93■□□□□ 0.14
VMP1-201ENST00000262291 FDPSP14324 419 aaKnown RBP15.93■□□□□ 0.14
VMP1-201ENST00000262291 TMEM87AQ8NBN3 555 aa15.93■□□□□ 0.14
VMP1-201ENST00000262291 ZNF274Q96GC6 653 aaPredicted RBP15.93■□□□□ 0.14
VMP1-201ENST00000262291 TNRC6CQ9HCJ0 1690 aaKnown RBP15.93■□□□□ 0.14
VMP1-201ENST00000262291 UBE2HP62256 183 aa15.93■□□□□ 0.14
VMP1-201ENST00000262291 KRT85P78386 507 aa15.93■□□□□ 0.14
VMP1-201ENST00000262291 RESTQ13127 1097 aa15.93■□□□□ 0.14
VMP1-201ENST00000262291 MICU3Q86XE3 530 aa15.93■□□□□ 0.14
VMP1-201ENST00000262291 ADD1P35611 737 aaKnown RBP15.92■□□□□ 0.14
VMP1-201ENST00000262291 PRR5LQ6MZQ0 368 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 LY75O60449 1722 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 C4AP0C0L4 1744 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 MAGEB6P1A0A0J9YX57 407 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 OFD1O75665 1012 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 GYS1P13807 737 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 PRDX5P30044 214 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 HIBADHP31937 336 aaKnown RBP15.92■□□□□ 0.14
VMP1-201ENST00000262291 LRSAM1Q6UWE0 723 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 NFXL1Q6ZNB6 911 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 AIFM3Q96NN9 605 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 ZSWIM5Q9P217 1185 aa15.92■□□□□ 0.14
VMP1-201ENST00000262291 UBE2Q2LH0YL09 131 aa15.91■□□□□ 0.14
VMP1-201ENST00000262291 MSNP26038 577 aaKnown RBP15.91■□□□□ 0.14
VMP1-201ENST00000262291 PROM2Q8N271 834 aa15.91■□□□□ 0.14
VMP1-201ENST00000262291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.91■□□□□ 0.14
VMP1-201ENST00000262291 NAA16Q6N069 864 aaPredicted RBP15.91■□□□□ 0.14
VMP1-201ENST00000262291 FBXO33Q7Z6M2 555 aa15.91■□□□□ 0.14
VMP1-201ENST00000262291 ZSCAN30Q86W11 494 aa15.91■□□□□ 0.14
VMP1-201ENST00000262291 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
VMP1-201ENST00000262291 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
VMP1-201ENST00000262291 CARMIL3Q8ND23 1372 aa15.91■□□□□ 0.14
VMP1-201ENST00000262291 CPLX1O14810 134 aa15.9■□□□□ 0.14
VMP1-201ENST00000262291 LIG1P18858 919 aa15.9■□□□□ 0.14
VMP1-201ENST00000262291 TMEM67Q5HYA8 995 aa15.9■□□□□ 0.14
VMP1-201ENST00000262291 GIMAP6Q6P9H5 292 aa15.9■□□□□ 0.14
VMP1-201ENST00000262291 SH2B2O14492 632 aaPredicted RBP15.9■□□□□ 0.14
VMP1-201ENST00000262291 PRDM1O75626 825 aa15.9■□□□□ 0.14
VMP1-201ENST00000262291 PHKBQ93100 1093 aa15.9■□□□□ 0.14
VMP1-201ENST00000262291 ANGEL1Q9UNK9 670 aaKnown RBP15.9■□□□□ 0.14
VMP1-201ENST00000262291 DOCK2Q92608 1830 aa15.9■□□□□ 0.14
VMP1-201ENST00000262291 IFIT3O14879 490 aaKnown RBP15.89■□□□□ 0.13
VMP1-201ENST00000262291 SERPINB2P05120 415 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 CAMK4Q16566 473 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 MFSD6Q6ZSS7 791 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 AATFQ9NY61 560 aaKnown RBP eCLIP15.89■□□□□ 0.13
VMP1-201ENST00000262291 ORC3Q9UBD5 711 aaPredicted RBP15.89■□□□□ 0.13
VMP1-201ENST00000262291 A0A1B0GUL6 1792 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 BRWD3Q6RI45 1802 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 CDC27P30260 824 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 MECOMQ03112 1051 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 AKNAD1Q5T1N1 836 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 CCDC82Q8N4S0 544 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 LEO1Q8WVC0 666 aaPredicted RBP15.89■□□□□ 0.13
VMP1-201ENST00000262291 NACAP1Q9BZK3 213 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 SALL1Q9NSC2 1324 aa15.89■□□□□ 0.13
VMP1-201ENST00000262291 HMGN5P82970 282 aaKnown RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 DDR1Q08345 913 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 TXNRD1Q16881 649 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 CMTR1Q8N1G2 835 aaKnown RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 IGDCC4Q8TDY8 1250 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 RPGRQ92834 1020 aaKnown RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 ISY1Q9ULR0 285 aaKnown RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 ALX1Q15699 326 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 GRIK5Q16478 980 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 RIOK1Q9BRS2 568 aaKnown RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 ANKRD2Q9GZV1 360 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 LY9Q9HBG7 655 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 UQCRHLA0A096LP55 91 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 UQCRHP07919 91 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 METAP2P50579 478 aaKnown RBP eCLIP15.88■□□□□ 0.13
VMP1-201ENST00000262291 EVCP57679 992 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 GRAPQ13588 217 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 CCDC183Q5T5S1 534 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 GRAPLQ8TC17 118 aaPredicted RBP15.88■□□□□ 0.13
VMP1-201ENST00000262291 TSPY26PQ9H489 355 aa15.88■□□□□ 0.13
VMP1-201ENST00000262291 PPARAQ07869 468 aa15.87■□□□□ 0.13
VMP1-201ENST00000262291 APOA5Q6Q788 366 aa15.87■□□□□ 0.13
VMP1-201ENST00000262291 ILDR1Q86SU0 546 aaPredicted RBP15.87■□□□□ 0.13
VMP1-201ENST00000262291 PGBD1Q96JS3 809 aa15.87■□□□□ 0.13
VMP1-201ENST00000262291 PNPLA7Q6ZV29 1317 aa15.87■□□□□ 0.13
VMP1-201ENST00000262291 GOLGA6L4A6NEF3 574 aa15.87■□□□□ 0.13
VMP1-201ENST00000262291 GPSM2P81274 684 aa15.87■□□□□ 0.13
VMP1-201ENST00000262291 NSUN4Q96CB9 384 aaKnown RBP15.87■□□□□ 0.13
VMP1-201ENST00000262291 CCDC173Q0VFZ6 552 aa15.86■□□□□ 0.13
VMP1-201ENST00000262291 ZNF827Q17R98 1081 aa15.86■□□□□ 0.13
VMP1-201ENST00000262291 CSPP1Q1MSJ5 1256 aa15.86■□□□□ 0.13
VMP1-201ENST00000262291 CHMP4CQ96CF2 233 aa15.86■□□□□ 0.13
VMP1-201ENST00000262291 C8orf76Q96K31 380 aa15.86■□□□□ 0.13
VMP1-201ENST00000262291 CYP2D6P10635 497 aa15.86■□□□□ 0.13
VMP1-201ENST00000262291 USP28Q96RU2 1077 aa15.86■□□□□ 0.13
VMP1-201ENST00000262291 BAZ2AQ9UIF9 1905 aaKnown RBP15.85■□□□□ 0.13
VMP1-201ENST00000262291 GOLGA8AA7E2F4 631 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 ZBTB43O43298 467 aa15.85■□□□□ 0.13
VMP1-201ENST00000262291 GNAT2P19087 354 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms