RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 RBM42Q9BTD8 480 aaKnown RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 RAB34Q9BZG1 259 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 NOP53Q9NZM5 478 aaKnown RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 SOS1Q07889 1333 aaPredicted RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 NOS1P29475 1434 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 UBE4AQ14139 1066 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 MUM1Q2TAK8 710 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 PPP1R13BQ96KQ4 1090 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 CCDC42Q96M95 316 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 SIL1Q9H173 461 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 GGNBP2Q9H3C7 697 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 SETD1AO15047 1707 aaKnown RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 LMOD1P29536 600 aaPredicted RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 CCT5P48643 541 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 SARM1Q6SZW1 724 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 UBAC1Q9BSL1 405 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 TM6SF1Q9BZW5 370 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 GCFC2P16383 781 aaKnown RBP9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 KCNJ6P48051 423 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 AK2P54819 239 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 CCDC122Q5T0U0 273 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 RUFY3Q7L099 469 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 CCDC63Q8NA47 563 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 SCOCQ9UIL1 159 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 RGS12O14924 1447 aa9.36□□□□□ -0.91
SNCAIP-201ENST00000261367 LMNAP02545 664 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 TTC39AQ5SRH9 613 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 NAA16Q6N069 864 aaPredicted RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 DHX37Q8IY37 1157 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 SEC62Q99442 399 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 CNOT10Q9H9A5 744 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 EXOC6BQ9Y2D4 811 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 USP32Q8NFA0 1604 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 ADAM21Q9UKJ8 722 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 HDAC9Q9UKV0 1011 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 GUCA1BQ9UMX6 200 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 IQSEC3Q9UPP2 1182 aaPredicted RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 ACTN4O43707 911 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 SMARCA5O60264 1052 aaPredicted RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 RNASELQ05823 741 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 CRYMQ14894 314 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 PUS7Q96PZ0 661 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 CTTNBP2NLQ9P2B4 639 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 PPP2R2CQ9Y2T4 447 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 PSMA7O14818 248 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 ATP2A1O14983 1001 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 SOX12O15370 315 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 RNF40O75150 1001 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 VIMP08670 466 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 IDEP14735 1019 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 PEX19P40855 299 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 TRPC3Q13507 836 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 HDGFL1Q5TGJ6 251 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 FBXO41Q8TF61 875 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 CCDC43Q96MW1 224 aaKnown RBP9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 PARP2Q9UGN5 583 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 TMEM131LA2VDJ0 1609 aa9.35□□□□□ -0.91
SNCAIP-201ENST00000261367 FAM135BQ49AJ0 1406 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 HMGB1P1B2RPK0 211 aaPredicted RBP9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 STAG1Q8WVM7 1258 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 RBM6P78332 1123 aaKnown RBP9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 MLECQ14165 292 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 PPP1R7Q15435 360 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 NGDNQ8NEJ9 315 aaKnown RBP9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 TUBB6Q9BUF5 446 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 TMEM51Q9NW97 253 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 DAAM1Q9Y4D1 1078 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 SAR1BQ9Y6B6 198 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 PREX1Q8TCU6 1659 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 GLI2P10070 1586 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 ELF1P32519 619 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 ZBTB16Q05516 673 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 E2F4Q16254 413 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 CFAP221Q4G0U5 840 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 LEO1Q8WVC0 666 aaPredicted RBP9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 GDAP1L1Q96MZ0 367 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 ANAPC4Q9UJX5 808 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 TULP4Q9NRJ4 1543 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 VWA3BQ502W6 1294 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 MIER3Q7Z3K6 550 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 TEX9Q8N6V9 391 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 TCEAL9Q9UHQ7 104 aa9.34□□□□□ -0.91
SNCAIP-201ENST00000261367 A0A087WZG4 1122 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 MAP4K4O95819 1239 aaPredicted RBP9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 CHMLP26374 656 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 IGSF22Q8N9C0 903 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 CCDC197Q8NCU1 140 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 HAUS4Q9H6D7 363 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 WWC3Q9ULE0 1092 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 SKIP12755 728 aa9.33□□□□□ -0.92
SNCAIP-201ENST00000261367 EPHB4P54760 987 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms