RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 A0A0U1RQJ8 604 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 ZSCAN12O43309 604 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 MCM6Q14566 821 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 IMMTQ16891 758 aaKnown RBP18.3■□□□□ 0.52
LMNB1-201ENST00000261366 ATG9AQ7Z3C6 839 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 GRAMD1CQ8IYS0 662 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 CNNM3Q8NE01 707 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 CCDC12Q8WUD4 166 aaPredicted RBP18.3■□□□□ 0.52
LMNB1-201ENST00000261366 ATRIPQ8WXE1 791 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 CCP110O43303 1012 aa18.29■□□□□ 0.52
LMNB1-201ENST00000261366 ARFGAP3Q9NP61 516 aa18.29■□□□□ 0.52
LMNB1-201ENST00000261366 CBFA2T2O43439 604 aa18.29■□□□□ 0.52
LMNB1-201ENST00000261366 CCDC158Q5M9N0 1113 aa18.29■□□□□ 0.52
LMNB1-201ENST00000261366 C10orf67Q8IYJ2 551 aa18.29■□□□□ 0.52
LMNB1-201ENST00000261366 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
LMNB1-201ENST00000261366 IKBKBO14920 756 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 TRIM66O15016 1216 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 CSB-PGBD3P0DP91 1061 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 ADORA1P30542 326 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 ANTXR2P58335 489 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 METTL16Q86W50 562 aaKnown RBP18.28■□□□□ 0.52
LMNB1-201ENST00000261366 CCDC191Q8NCU4 936 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
LMNB1-201ENST00000261366 SLC39A14Q15043 492 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 LCMT1Q9UIC8 334 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 APPP05067 770 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 RAPGEF4Q8WZA2 1011 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
LMNB1-201ENST00000261366 ZBTB3Q9H5J0 574 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 SLC52A2Q9HAB3 445 aa18.28■□□□□ 0.52
LMNB1-201ENST00000261366 LAMA4Q16363 1823 aa18.27■□□□□ 0.52
LMNB1-201ENST00000261366 ARHGAP6O43182 974 aa18.27■□□□□ 0.52
LMNB1-201ENST00000261366 BMP6P22004 513 aa18.27■□□□□ 0.52
LMNB1-201ENST00000261366 TMEM139Q8IV31 216 aa18.27■□□□□ 0.52
LMNB1-201ENST00000261366 INCENPQ9NQS7 918 aa18.27■□□□□ 0.52
LMNB1-201ENST00000261366 FEZ2Q9UHY8 353 aaPredicted RBP18.27■□□□□ 0.52
LMNB1-201ENST00000261366 FOXP2O15409 715 aa18.27■□□□□ 0.51
LMNB1-201ENST00000261366 SCARF1Q14162 830 aa18.27■□□□□ 0.51
LMNB1-201ENST00000261366 ZSCAN26Q16670 478 aa18.27■□□□□ 0.51
LMNB1-201ENST00000261366 RABL6Q3YEC7 729 aaPredicted RBP18.27■□□□□ 0.51
LMNB1-201ENST00000261366 KRT40Q6A162 431 aa18.27■□□□□ 0.51
LMNB1-201ENST00000261366 SRRTQ9BXP5 876 aaKnown RBP18.27■□□□□ 0.51
LMNB1-201ENST00000261366 SUGCTQ9HAC7 445 aa18.27■□□□□ 0.51
LMNB1-201ENST00000261366 H3BQF6 201 aa18.26■□□□□ 0.51
LMNB1-201ENST00000261366 TULP2O00295 520 aa18.26■□□□□ 0.51
LMNB1-201ENST00000261366 KCNJ6P48051 423 aa18.26■□□□□ 0.51
LMNB1-201ENST00000261366 NFE2L3Q9Y4A8 694 aa18.26■□□□□ 0.51
LMNB1-201ENST00000261366 GRIN1Q05586 938 aa18.26■□□□□ 0.51
LMNB1-201ENST00000261366 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.517e-6■■□□□ 12.8
LMNB1-201ENST00000261366 SKIDA1Q1XH10 827 aa18.26■□□□□ 0.51
LMNB1-201ENST00000261366 SOWAHDA6NJG2 315 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 ZNF213O14771 459 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 PHACTR2O75167 634 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 TNNT3P45378 269 aaPredicted RBP18.25■□□□□ 0.51
LMNB1-201ENST00000261366 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 KLHL10Q6JEL2 608 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 TTLL7Q6ZT98 887 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 TXLNBQ8N3L3 684 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 MRPL44Q9H9J2 332 aaKnown RBP18.25■□□□□ 0.51
LMNB1-201ENST00000261366 KCNH3Q9ULD8 1083 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 SLIT3O75094 1523 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 ABCC6O95255 1503 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 MYH15Q9Y2K3 1946 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 COBLO75128 1261 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 FOXO4P98177 505 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 GPS2Q13227 327 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 NCOA7Q8NI08 942 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 SAMSN1Q9NSI8 373 aaKnown RBP18.25■□□□□ 0.51
LMNB1-201ENST00000261366 TUBE1Q9UJT0 475 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 MRFAP1Q9Y605 127 aa18.25■□□□□ 0.51
LMNB1-201ENST00000261366 PRR29P0C7W0 189 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 METAP2P50579 478 aaKnown RBP eCLIP18.24■□□□□ 0.51
LMNB1-201ENST00000261366 MAP3K9P80192 1104 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 GPR161Q8N6U8 529 aaKnown RBP18.24■□□□□ 0.51
LMNB1-201ENST00000261366 VPS18Q9P253 973 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 SNRPA1P09661 255 aaKnown RBP18.24■□□□□ 0.51
LMNB1-201ENST00000261366 LONRF2Q1L5Z9 754 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 NFXL1Q6ZNB6 911 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 CERS3Q8IU89 383 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 CREBRFQ8IUR6 639 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 MB21D2Q8IYB1 491 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-201ENST00000261366 TC2NQ8N9U0 490 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 MPHOSPH8Q99549 860 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 FUT8Q9BYC5 575 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 ADAM21Q9UKJ8 722 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 ZAP70P43403 619 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 STX17P56962 302 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 PDE11AQ9HCR9 933 aa18.24■□□□□ 0.51
LMNB1-201ENST00000261366 MST1RQ04912 1400 aa18.23■□□□□ 0.51
LMNB1-201ENST00000261366 TUBB4AP04350 444 aa18.23■□□□□ 0.51
LMNB1-201ENST00000261366 RHOXF2BP0C7M4 288 aa18.23■□□□□ 0.51
LMNB1-201ENST00000261366 CADPS2Q86UW7 1296 aa18.23■□□□□ 0.51
LMNB1-201ENST00000261366 RHOXF2Q9BQY4 288 aa18.23■□□□□ 0.51
LMNB1-201ENST00000261366 N4BP1O75113 896 aaKnown RBP18.23■□□□□ 0.51
LMNB1-201ENST00000261366 TPM1P09493 284 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms