RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CYP1A2P05177 515 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 FERP16591 822 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
GPNMB-201ENST00000258733 SREK1Q8WXA9 508 aaKnown RBP8.78□□□□□ -1
GPNMB-201ENST00000258733 ERP27Q96DN0 273 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 TSPY26PQ9H489 355 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 PBRM1Q86U86 1689 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 PPRC1Q5VV67 1664 aaKnown RBP8.78□□□□□ -1
GPNMB-201ENST00000258733 KDM1AO60341 852 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 KIAA0754O94854 1291 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 SLU7O95391 586 aaKnown RBP8.78□□□□□ -1
GPNMB-201ENST00000258733 MAP7D1Q3KQU3 841 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 SMARCC2Q8TAQ2 1214 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 IWS1Q96ST2 819 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 LMBRD1Q9NUN5 540 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 CHPF2Q9P2E5 772 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 PAIP2BQ9ULR5 123 aaKnown RBP8.78□□□□□ -1
GPNMB-201ENST00000258733 ZNF652Q9Y2D9 606 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 SLC45A1Q9Y2W3 748 aa8.78□□□□□ -1
GPNMB-201ENST00000258733 FMN1Q68DA7 1419 aa8.77□□□□□ -1
GPNMB-201ENST00000258733 ATP9BO43861 1147 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 EZRP15311 586 aaKnown RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 GNAT2P19087 354 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 GBP2P32456 591 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 LMBRD2Q68DH5 695 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 DPY19L2Q6NUT2 758 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 SLC15A3Q8IY34 581 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 YIPF3Q9GZM5 350 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 PDGFDQ9GZP0 370 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 TIMM22Q9Y584 194 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 POLR1AO95602 1720 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 NCOA2Q15596 1464 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 HFM1A2PYH4 1435 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 UGGT2Q9NYU1 1516 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 P4HA2O15460 535 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 SGTAO43765 313 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 TBCAO75347 108 aaKnown RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 CSPG5O95196 566 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 MIS18BP1Q6P0N0 1132 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 DRC7Q8IY82 874 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 NDUFAF2Q8N183 169 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 ZFAND2BQ8WV99 257 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 ATP6V0A4Q9HBG4 840 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 KIAA1522Q9P206 1035 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 BZW2Q9Y6E2 419 aaKnown RBP8.77□□□□□ -1.01
GPNMB-201ENST00000258733 SCINQ9Y6U3 715 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 PLEKHH1Q9ULM0 1364 aa8.77□□□□□ -1.01
GPNMB-201ENST00000258733 NPHP1O15259 732 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 SART1O43290 800 aaKnown RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 RPL17P18621 184 aaKnown RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 IBSPP21815 317 aaPredicted RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 TCF7P36402 384 aaPredicted RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 CNGA3Q16281 694 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 MCTP1Q6DN14 999 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 DNAI1Q9UI46 699 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 SLC30A1Q9Y6M5 507 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 LDHCP07864 332 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 ENDOUP21128 410 aaKnown RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 CTAG1AP78358 180 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 FAM69CQ0P6D2 419 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 DCTN1Q14203 1278 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 CCDC170Q8IYT3 715 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 THEMISQ8N1K5 641 aaPredicted RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 KIAA1958Q8N8K9 716 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 CEP63Q96MT8 703 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 UTP14AQ9BVJ6 771 aaKnown RBP8.76□□□□□ -1.01
GPNMB-201ENST00000258733 ACBD3Q9H3P7 528 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 GJA3Q9Y6H8 435 aa8.76□□□□□ -1.01
GPNMB-201ENST00000258733 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 ERICH2A1L162 156 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 FAM25EA8MYX2 175 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 GFPT2O94808 682 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 PSME1Q06323 249 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 WTAPQ15007 396 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 CFAP58Q5T655 872 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 CCDC146Q8IYE0 955 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 GCC1Q96CN9 775 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 OXCT2Q9BYC2 517 aaPredicted RBP8.75□□□□□ -1.01
GPNMB-201ENST00000258733 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 ZCWPW1Q9H0M4 648 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 PCDH18Q9HCL0 1135 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 SLC39A2Q9NP94 309 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 DCAF16Q9NXF7 216 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
GPNMB-201ENST00000258733 UHRF1BP1LA0JNW5 1464 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 HALP42357 657 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 PSMD7P51665 324 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 FAM160A1Q05DH4 1040 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 BIRC3Q13489 604 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 SEPT2Q15019 361 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 BICDL1Q6ZP65 573 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 NCCRP1Q6ZVX7 275 aaPredicted RBP8.75□□□□□ -1.01
GPNMB-201ENST00000258733 RELL1Q8IUW5 271 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 LILRB2Q8N423 598 aa8.75□□□□□ -1.01
GPNMB-201ENST00000258733 GBP7Q8N8V2 638 aaPredicted RBP8.75□□□□□ -1.01
GPNMB-201ENST00000258733 SH3TC2Q8TF17 1288 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms