RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 HSPD1P10809 573 aaKnown RBP13.17□□□□□ -0.3
TROAP-201ENST00000257909 PNOCQ13519 176 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 HSP90B2PQ58FF3 399 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
TROAP-201ENST00000257909 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 NFAT5O94916 1531 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
TROAP-201ENST00000257909 GCKRQ14397 625 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
TROAP-201ENST00000257909 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
TROAP-201ENST00000257909 ELOA2Q8IYF1 753 aaPredicted RBP13.17□□□□□ -0.3
TROAP-201ENST00000257909 PPM1EQ8WY54 764 aa13.17□□□□□ -0.3
TROAP-201ENST00000257909 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 RNMTO43148 476 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 KIF5CO60282 957 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 MARCKSP29966 332 aaPredicted RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 ADKP55263 362 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 CCDC102BQ68D86 513 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 CPLX1O14810 134 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 KARSQ15046 597 aaKnown RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 EPHA10Q5JZY3 1008 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 IP6K1Q92551 441 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 PANX2Q96RD6 677 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 MED4Q9NPJ6 270 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 FAN1Q9Y2M0 1017 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 JRKLQ9Y4A0 524 aa13.16□□□□□ -0.3
TROAP-201ENST00000257909 SIPA1L3O60292 1781 aaPredicted RBP13.16□□□□□ -0.3
TROAP-201ENST00000257909 NBPF6Q5VWK0 638 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 SHC4Q6S5L8 630 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 ABTB2Q8N961 1025 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 NBPF4Q96M43 638 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 PXDNQ92626 1479 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 CORO7P57737 925 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 METTL16Q86W50 562 aaKnown RBP13.15□□□□□ -0.3
TROAP-201ENST00000257909 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
TROAP-201ENST00000257909 ABCB6Q9NP58 842 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
TROAP-201ENST00000257909 PCDHA5Q9Y5H7 936 aa13.15□□□□□ -0.3
TROAP-201ENST00000257909 ZNF18P17022 549 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 PTPN21Q16825 1174 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 ENOX1Q8TC92 643 aaKnown RBP13.14□□□□□ -0.31
TROAP-201ENST00000257909 PNKPQ96T60 521 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 DESI2Q9BSY9 194 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 RAI14Q9P0K7 980 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 KLF18A0A0U1RQI7 1052 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 GOLGA8BA8MQT2 603 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 AKR1B15C9JRZ8 316 aaPredicted RBP13.14□□□□□ -0.31
TROAP-201ENST00000257909 GOLIM4O00461 696 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 CASP8Q14790 479 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
TROAP-201ENST00000257909 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
TROAP-201ENST00000257909 MLKLQ8NB16 471 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 NFE2L3Q9Y4A8 694 aa13.14□□□□□ -0.31
TROAP-201ENST00000257909 PIP4K2BP78356 416 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 PDIA6Q15084 440 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 PTPAQ15257 358 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
TROAP-201ENST00000257909 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
TROAP-201ENST00000257909 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 ADGRG1Q9Y653 693 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 MAST3O60307 1309 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 CTAGE9A4FU28 777 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 N4BP1O75113 896 aaKnown RBP13.13□□□□□ -0.31
TROAP-201ENST00000257909 PDE4BQ07343 736 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 LRRC31Q6UY01 552 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
TROAP-201ENST00000257909 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 LZTFL1Q9NQ48 299 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
TROAP-201ENST00000257909 PRC1O43663 620 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 NR1I3Q14994 352 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 WHAMMP3Q1A5X7 153 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms