RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 MKRN1Q9UHC7 482 aaKnown RBP10.47□□□□□ -0.73
TMEM258-201ENST00000257262 DBNLQ9UJU6 430 aaKnown RBP10.47□□□□□ -0.73
TMEM258-201ENST00000257262 ABT1Q9ULW3 272 aaKnown RBP10.47□□□□□ -0.73
TMEM258-201ENST00000257262 SUGT1Q9Y2Z0 365 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 PCDHB15Q9Y5E8 787 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 RAB11FIP3O75154 756 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 SEC24BO95487 1268 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 LDHBP07195 334 aaKnown RBP10.46□□□□□ -0.73
TMEM258-201ENST00000257262 MCAMP43121 646 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 TTC39AQ5SRH9 613 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 AACSQ86V21 672 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 TEKT1Q969V4 418 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 KIF1BPQ96EK5 621 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 BCL11AQ9H165 835 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 ZNF70Q9UC06 446 aaPredicted RBP10.46□□□□□ -0.73
TMEM258-201ENST00000257262 TLL2Q9Y6L7 1015 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 MAST3O60307 1309 aa10.46□□□□□ -0.73
TMEM258-201ENST00000257262 PDS5AQ29RF7 1337 aaKnown RBP10.46□□□□□ -0.73
TMEM258-201ENST00000257262 AKAP11Q9UKA4 1901 aa10.46□□□□□ -0.74
TMEM258-201ENST00000257262 DIXDC1Q155Q3 683 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 HHIPL2Q6UWX4 724 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 TBC1D9Q6ZT07 1266 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 SAPCD2Q86UD0 394 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 APOBEC3FQ8IUX4 373 aaKnown RBP10.45□□□□□ -0.74
TMEM258-201ENST00000257262 CLASRPQ8N2M8 674 aaKnown RBP10.45□□□□□ -0.74
TMEM258-201ENST00000257262 ZGPATQ8N5A5 531 aaKnown RBP10.45□□□□□ -0.74
TMEM258-201ENST00000257262 ZDHHC15Q96MV8 337 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 DEFB129Q9H1M3 183 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 VEZTQ9HBM0 779 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 SNRKQ9NRH2 765 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 MYH2Q9UKX2 1941 aa10.45□□□□□ -0.74
TMEM258-201ENST00000257262 CNTNAP1P78357 1384 aa10.44□□□□□ -0.74
TMEM258-201ENST00000257262 RASSF10A6NK89 507 aa10.44□□□□□ -0.74
TMEM258-201ENST00000257262 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
TMEM258-201ENST00000257262 SPTY2D1Q68D10 685 aaPredicted RBP10.44□□□□□ -0.74
TMEM258-201ENST00000257262 APOBEC3HQ6NTF7 200 aaKnown RBP10.44□□□□□ -0.74
TMEM258-201ENST00000257262 ERICH6Q7L0X2 663 aa10.44□□□□□ -0.74
TMEM258-201ENST00000257262 C2orf69Q8N8R5 385 aa10.44□□□□□ -0.74
TMEM258-201ENST00000257262 ZNF512BQ96KM6 892 aaPredicted RBP10.44□□□□□ -0.74
TMEM258-201ENST00000257262 GBA2Q9HCG7 927 aaPredicted RBP10.44□□□□□ -0.74
TMEM258-201ENST00000257262 MYO5AQ9Y4I1 1855 aaKnown RBP10.44□□□□□ -0.74
TMEM258-201ENST00000257262 TCP10L2B9ZVM9 353 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 SMARCA5O60264 1052 aaPredicted RBP10.43□□□□□ -0.74
TMEM258-201ENST00000257262 CYP2E1P05181 493 aaPredicted RBP10.43□□□□□ -0.74
TMEM258-201ENST00000257262 IFIT2P09913 472 aaKnown RBP10.43□□□□□ -0.74
TMEM258-201ENST00000257262 ZAP70P43403 619 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 VEGFBP49765 207 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 CACNB3P54284 484 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 MECOMQ03112 1051 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
TMEM258-201ENST00000257262 RASA3Q14644 834 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 CYP4F22Q6NT55 531 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 MOB2Q70IA6 237 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 DZIP1Q86YF9 867 aaKnown RBP10.43□□□□□ -0.74
TMEM258-201ENST00000257262 LRRCC1Q9C099 1032 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 DAGLAQ9Y4D2 1042 aa10.43□□□□□ -0.74
TMEM258-201ENST00000257262 WDR33Q9C0J8 1336 aaKnown RBP10.42□□□□□ -0.74
TMEM258-201ENST00000257262 NF2P35240 595 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 TNNI2P48788 182 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 HUNKP57058 714 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 GRM1Q13255 1194 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 PRKG1Q13976 671 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 CDC42EP5Q6NZY7 148 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 PAXIP1Q6ZW49 1069 aaPredicted RBP10.42□□□□□ -0.74
TMEM258-201ENST00000257262 JMYQ8N9B5 988 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 ZNF384Q8TF68 577 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 NSUN4Q96CB9 384 aaKnown RBP10.42□□□□□ -0.74
TMEM258-201ENST00000257262 FAM163AQ96GL9 167 aaPredicted RBP10.42□□□□□ -0.74
TMEM258-201ENST00000257262 USP40Q9NVE5 1235 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 RAI14Q9P0K7 980 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 LRP2BPQ9P2M1 347 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 FZD1Q9UP38 647 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 PPP2R3BQ9Y5P8 575 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 NDUFB9Q9Y6M9 179 aa10.42□□□□□ -0.74
TMEM258-201ENST00000257262 PSEN1P49768 467 aa10.41□□□□□ -0.74
TMEM258-201ENST00000257262 TNFAIP1Q13829 316 aa10.41□□□□□ -0.74
TMEM258-201ENST00000257262 NBPF12Q5TAG4 269 aaPredicted RBP10.41□□□□□ -0.74
TMEM258-201ENST00000257262 RGMBQ6NW40 437 aa10.41□□□□□ -0.74
TMEM258-201ENST00000257262 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
TMEM258-201ENST00000257262 HHIPL1Q96JK4 782 aa10.41□□□□□ -0.74
TMEM258-201ENST00000257262 TEPSINQ96N21 525 aa10.41□□□□□ -0.74
TMEM258-201ENST00000257262 ANTXR1Q9H6X2 564 aa10.41□□□□□ -0.74
TMEM258-201ENST00000257262 PIH1D3Q9NQM4 214 aaKnown RBP10.41□□□□□ -0.74
TMEM258-201ENST00000257262 MROH7-TTC4A0A0A0MT08 1334 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 GAKO14976 1311 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 PAPPA2Q9BXP8 1791 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 UBE2Q2LH0YL09 131 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 LDHCP07864 332 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 BTDP43251 543 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 FKBP1BP68106 108 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 IRX6P78412 446 aaPredicted RBP10.4□□□□□ -0.74
TMEM258-201ENST00000257262 GSTO1P78417 241 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 AAMPQ13685 434 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
TMEM258-201ENST00000257262 SUPT20HL1Q3ZLR7 823 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 FKBP1CQ5VVH2 108 aa10.4□□□□□ -0.74
TMEM258-201ENST00000257262 CDAN1Q8IWY9 1227 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms