RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RFX1P22670 979 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 FOXD4L6Q3SYB3 417 aaPredicted RBP15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 FOXD4L3Q6VB84 417 aaPredicted RBP15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 ATP8A2Q9NTI2 1148 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 PRC1O43663 620 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 KCTD2Q14681 263 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 KRT26Q7Z3Y9 468 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 MICU3Q86XE3 530 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 DDX12PQ92771 950 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 PIK3C2BO00750 1634 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 CPDO75976 1380 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 ARHGEF37A1IGU5 675 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 BACH1O14867 736 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 KRT25Q7Z3Z0 450 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 SLC10A4Q96EP9 437 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 FBLN1P23142 703 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 BSDC1Q9NW68 430 aaPredicted RBP15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 IQSEC3Q9UPP2 1182 aaPredicted RBP15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 TECPR2O15040 1411 aa15.31■□□□□ 0.04
PRPF38A-201ENST00000257181 STYK1Q6J9G0 422 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 CAGE1Q8TC20 777 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 MADDQ8WXG6 1647 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 FIBPO43427 364 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 SDSP20132 328 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 DDX19AQ9NUU7 478 aaKnown RBP15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 USP19O94966 1318 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 CDHR2Q9BYE9 1310 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 ECE1P42892 770 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 BRAPQ7Z569 592 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 HELBQ8NG08 1087 aaPredicted RBP15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 PIGBQ92521 554 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 PPRC1Q5VV67 1664 aaKnown RBP15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 SLC8A3P57103 927 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 AP5M1Q9H0R1 490 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 PHLPP2Q6ZVD8 1323 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 RPS12P25398 132 aaKnown RBP15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 SPAG1Q07617 926 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 TTLL7Q6ZT98 887 aa15.3■□□□□ 0.04
PRPF38A-201ENST00000257181 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.042e-7■■□□□ 14.1
PRPF38A-201ENST00000257181 DHX32Q7L7V1 743 aaKnown RBP15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 FOXP4Q8IVH2 680 aaPredicted RBP15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 TAF4BQ92750 862 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 CDHR1Q96JP9 859 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 NAP1L5Q96NT1 182 aaPredicted RBP15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 KBTBD3Q8NAB2 608 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 TBC1D5Q92609 795 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 CRAMP1Q96RY5 1269 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 ATP5JP18859 108 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 CHRNDQ07001 517 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 OTUD6AQ7L8S5 288 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 HOOK3Q86VS8 718 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 PREX1Q8TCU6 1659 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 FAM13AO94988 1023 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 CA8P35219 290 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 HS2ST1Q7LGA3 356 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 IWS1Q96ST2 819 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 UBA5Q9GZZ9 404 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 CD163L1Q9NR16 1453 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
PRPF38A-201ENST00000257181 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 CAVIN1Q6NZI2 390 aaKnown RBP15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 FAM160B2Q86V87 743 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 IL17REQ8NFR9 667 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 ZNF341Q9BYN7 854 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 GINM1Q9NU53 330 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 DEXIO95424 95 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 FAM160B1Q5W0V3 765 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 RBM8AQ9Y5S9 174 aaKnown RBP15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 CCDC83Q8IWF9 413 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 SLIT1O75093 1534 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 AXDND1Q5T1B0 1012 aaPredicted RBP15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 DSCC1Q9BVC3 393 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 ZBTB1Q9Y2K1 713 aa15.28■□□□□ 0.04
PRPF38A-201ENST00000257181 RPL13P26373 211 aaKnown RBP15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 TGFB2P61812 414 aa15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 CERKLQ49MI3 558 aaPredicted RBP15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 RNF181Q9P0P0 153 aa15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 TRIM75PA6NK02 468 aa15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 ESYT1Q9BSJ8 1104 aa15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 PLVAPQ9BX97 442 aa15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 MTFR1LQ9H019 292 aa15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 VPS33BQ9H267 617 aa15.27■□□□□ 0.04
PRPF38A-201ENST00000257181 PHACTR2O75167 634 aa15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 HOXA7P31268 230 aaPredicted RBP15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 PLCD1P51178 756 aa15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 ADCY7P51828 1080 aa15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 KIDINS220Q9ULH0 1771 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms