RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 CAVIN1Q6NZI2 390 aaKnown RBP13.71□□□□□ -0.21
LIN28A-201ENST00000254231 STRBPQ96SI9 672 aaKnown RBP13.71□□□□□ -0.21
LIN28A-201ENST00000254231 CTNNA3Q9UI47 895 aa13.71□□□□□ -0.21
LIN28A-201ENST00000254231 AOX1Q06278 1338 aa13.71□□□□□ -0.21
LIN28A-201ENST00000254231 CCDC69A6NI79 296 aa13.71□□□□□ -0.22
LIN28A-201ENST00000254231 TCP10L2B9ZVM9 353 aa13.71□□□□□ -0.22
LIN28A-201ENST00000254231 FGFR2P21802 821 aa13.71□□□□□ -0.22
LIN28A-201ENST00000254231 RPS6KB1P23443 525 aa13.71□□□□□ -0.22
LIN28A-201ENST00000254231 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.22
LIN28A-201ENST00000254231 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.22
LIN28A-201ENST00000254231 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.22
LIN28A-201ENST00000254231 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 NCOA7Q8NI08 942 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 GBP4Q96PP9 640 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 CAMKK2Q96RR4 588 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 PANK2Q9BZ23 570 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 CRYBG1Q9Y4K1 1723 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 GOLGA8HP0CJ92 632 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 ADRA2BP18089 450 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 BTDP43251 543 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 GPR108Q9NPR9 543 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 ZFYP08048 801 aaPredicted RBP13.7□□□□□ -0.22
LIN28A-201ENST00000254231 RASGRP2Q7LDG7 609 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 RIC1Q4ADV7 1423 aa13.7□□□□□ -0.22
LIN28A-201ENST00000254231 MCM4P33991 863 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
LIN28A-201ENST00000254231 ZNF408Q9H9D4 720 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 PKD1L3Q7Z443 1732 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 TRAK2O60296 914 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 BBOX1O75936 387 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 ALDH1B1P30837 517 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 FTOQ9C0B1 505 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIN28A-201ENST00000254231 EPB41L4AQ9HCS5 686 aaPredicted RBP13.69□□□□□ -0.22
LIN28A-201ENST00000254231 BRCA2P51587 3418 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 SYT1P21579 422 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 CRACR2BQ8N4Y2 399 aaPredicted RBP13.69□□□□□ -0.22
LIN28A-201ENST00000254231 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
LIN28A-201ENST00000254231 MCM5P33992 734 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 NEDD4P46934 1319 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 CACNA1FO60840 1977 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 USP17L3A6NCW0 530 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 USP17L4A6NCW7 530 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 GSG1L2A8MUP6 293 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 NPR1P16066 1061 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
LIN28A-201ENST00000254231 USP17L1Q7RTZ2 530 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 CRNKL1Q9BZJ0 848 aaKnown RBP13.68□□□□□ -0.22
LIN28A-201ENST00000254231 USP40Q9NVE5 1235 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
LIN28A-201ENST00000254231 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
LIN28A-201ENST00000254231 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.67□□□□□ -0.22
LIN28A-201ENST00000254231 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
LIN28A-201ENST00000254231 SHTN1A0MZ66 631 aa13.67□□□□□ -0.22
LIN28A-201ENST00000254231 CAMK4Q16566 473 aa13.67□□□□□ -0.22
LIN28A-201ENST00000254231 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
LIN28A-201ENST00000254231 AMOTL1Q8IY63 956 aa13.67□□□□□ -0.22
LIN28A-201ENST00000254231 TTLL6Q8N841 843 aa13.67□□□□□ -0.22
LIN28A-201ENST00000254231 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
LIN28A-201ENST00000254231 PATL2C9JE40 543 aaKnown RBP13.67□□□□□ -0.22
LIN28A-201ENST00000254231 ZNF444Q8N0Y2 327 aaPredicted RBP13.67□□□□□ -0.22
LIN28A-201ENST00000254231 TOB2Q14106 344 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-201ENST00000254231 NLGN2Q8NFZ4 835 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 NSUN4Q96CB9 384 aaKnown RBP13.66□□□□□ -0.22
LIN28A-201ENST00000254231 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 GOLGA8AA7E2F4 631 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 RASSF7Q02833 373 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 PPARAQ07869 468 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 KRT32Q14532 448 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 CDC37L1Q7L3B6 337 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 CREBRFQ8IUR6 639 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 ERCC4Q92889 916 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-201ENST00000254231 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-201ENST00000254231 STX6O43752 255 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 BAG3O95817 575 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 PLCD1P51178 756 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 TFAP4Q01664 338 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
LIN28A-201ENST00000254231 SCRN1Q12765 414 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
LIN28A-201ENST00000254231 ABCC6O95255 1503 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
LIN28A-201ENST00000254231 ATP2B4P23634 1241 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
LIN28A-201ENST00000254231 METAP2P50579 478 aaKnown RBP eCLIP13.65□□□□□ -0.22
LIN28A-201ENST00000254231 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
LIN28A-201ENST00000254231 GPR162Q16538 588 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 SPICE1Q8N0Z3 855 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 ZNF384Q8TF68 577 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 ARFGEF2Q9Y6D5 1785 aa13.65□□□□□ -0.22
LIN28A-201ENST00000254231 SNAP25P60880 206 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms