RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 MROH7-TTC4A0A0A0MT08 1334 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 CDK5RAP2Q96SN8 1893 aa17.4■□□□□ 0.38
CNN1-201ENST00000252456 WDR33Q9C0J8 1336 aaKnown RBP17.4■□□□□ 0.38
CNN1-201ENST00000252456 IFIT2P09913 472 aaKnown RBP17.4■□□□□ 0.38
CNN1-201ENST00000252456 AAMPQ13685 434 aa17.4■□□□□ 0.38
CNN1-201ENST00000252456 NFIAQ12857 509 aa17.39■□□□□ 0.38
CNN1-201ENST00000252456 FAM83AQ86UY5 434 aa17.39■□□□□ 0.38
CNN1-201ENST00000252456 BCL11AQ9H165 835 aa17.39■□□□□ 0.38
CNN1-201ENST00000252456 ANTXR1Q9H6X2 564 aa17.39■□□□□ 0.38
CNN1-201ENST00000252456 RAI14Q9P0K7 980 aa17.39■□□□□ 0.38
CNN1-201ENST00000252456 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.38
CNN1-201ENST00000252456 GPR75-ASB3A0A0A6YYF3 556 aa17.39■□□□□ 0.37
CNN1-201ENST00000252456 NF2P35240 595 aa17.39■□□□□ 0.37
CNN1-201ENST00000252456 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
CNN1-201ENST00000252456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.39■□□□□ 0.37
CNN1-201ENST00000252456 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
CNN1-201ENST00000252456 FAM155AB1AL88 458 aaPredicted RBP17.38■□□□□ 0.37
CNN1-201ENST00000252456 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 BTDP43251 543 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 TNNI2P48788 182 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 RHBDL3P58872 404 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 RGMBQ6NW40 437 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
CNN1-201ENST00000252456 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 USP40Q9NVE5 1235 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 TMOD2Q9NZR1 351 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 FAM198AQ9UFP1 575 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 FOCADQ5VW36 1801 aa17.38■□□□□ 0.37
CNN1-201ENST00000252456 ECE1P42892 770 aa17.37■□□□□ 0.37
CNN1-201ENST00000252456 PRKG1Q13976 671 aa17.37■□□□□ 0.37
CNN1-201ENST00000252456 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
CNN1-201ENST00000252456 AOC2O75106 756 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 WDHD1O75717 1129 aaPredicted RBP17.36■□□□□ 0.37
CNN1-201ENST00000252456 ATP5JP18859 108 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 GSTO1P78417 241 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 GRM1Q13255 1194 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 SUPT20HL1Q3ZLR7 823 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 LDLRAD1Q5T700 205 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 ZIC5Q96T25 663 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 IDI2Q9BXS1 227 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 IRX6P78412 446 aaPredicted RBP17.36■□□□□ 0.37
CNN1-201ENST00000252456 TTLL12Q14166 644 aaPredicted RBP17.36■□□□□ 0.37
CNN1-201ENST00000252456 NAA16Q6N069 864 aaPredicted RBP17.36■□□□□ 0.37
CNN1-201ENST00000252456 ZFPM1Q8IX07 1006 aa17.36■□□□□ 0.37
CNN1-201ENST00000252456 EDC3Q96F86 508 aaKnown RBP17.36■□□□□ 0.37
CNN1-201ENST00000252456 ANGEL1Q9UNK9 670 aaKnown RBP17.36■□□□□ 0.37
CNN1-201ENST00000252456 LAMB1P07942 1786 aa17.35■□□□□ 0.37
CNN1-201ENST00000252456 MYH7P12883 1935 aa17.35■□□□□ 0.37
CNN1-201ENST00000252456 IGSF3O75054 1194 aa17.35■□□□□ 0.37
CNN1-201ENST00000252456 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
CNN1-201ENST00000252456 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
CNN1-201ENST00000252456 LDHCP07864 332 aa17.35■□□□□ 0.37
CNN1-201ENST00000252456 TCP10Q12799 353 aa17.35■□□□□ 0.37
CNN1-201ENST00000252456 RASAL3Q86YV0 1011 aa17.35■□□□□ 0.37
CNN1-201ENST00000252456 FAM151AQ8WW52 585 aa17.35■□□□□ 0.37
CNN1-201ENST00000252456 DDX4Q9NQI0 724 aaKnown RBP17.35■□□□□ 0.37
CNN1-201ENST00000252456 SLC10A3P09131 477 aa17.34■□□□□ 0.37
CNN1-201ENST00000252456 RGS3P49796 1198 aa17.34■□□□□ 0.37
CNN1-201ENST00000252456 ZNF157P51786 506 aaPredicted RBP17.34■□□□□ 0.37
CNN1-201ENST00000252456 ARMC9Q7Z3E5 817 aa17.34■□□□□ 0.37
CNN1-201ENST00000252456 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
CNN1-201ENST00000252456 BOLA2Q9H3K6 86 aa17.34■□□□□ 0.37
CNN1-201ENST00000252456 ATRNL1Q5VV63 1379 aa17.34■□□□□ 0.37
CNN1-201ENST00000252456 GOLIM4O00461 696 aa17.33■□□□□ 0.37
CNN1-201ENST00000252456 PPP1R12BO60237 982 aaPredicted RBP17.33■□□□□ 0.37
CNN1-201ENST00000252456 DNAJC2Q99543 621 aaKnown RBP17.33■□□□□ 0.37
CNN1-201ENST00000252456 HAUS7Q99871 368 aa17.33■□□□□ 0.37
CNN1-201ENST00000252456 SALL3Q9BXA9 1300 aa17.33■□□□□ 0.36
CNN1-201ENST00000252456 ENTPD3O75355 529 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 IGHDP01880 384 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 MAP2K2P36507 400 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 PPP4CP60510 307 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 NOGQ13253 232 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 TSHZ3Q63HK5 1081 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 MAGEB6Q8N7X4 407 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 CCDC102AQ96A19 550 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 CLMNQ96JQ2 1002 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 ECHDC1Q9NTX5 307 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
CNN1-201ENST00000252456 SIPA1L1O43166 1804 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 HSPA1AP0DMV8 641 aaKnown RBP17.32■□□□□ 0.36
CNN1-201ENST00000252456 HSPA1BP0DMV9 641 aaKnown RBP17.32■□□□□ 0.36
CNN1-201ENST00000252456 TTF1Q15361 905 aaPredicted RBP17.32■□□□□ 0.36
CNN1-201ENST00000252456 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 SH3RF3Q8TEJ3 882 aaPredicted RBP17.32■□□□□ 0.36
CNN1-201ENST00000252456 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
CNN1-201ENST00000252456 NPM3O75607 178 aaKnown RBP17.31■□□□□ 0.36
CNN1-201ENST00000252456 MAP4K4O95819 1239 aaPredicted RBP17.31■□□□□ 0.36
CNN1-201ENST00000252456 CYP7A1P22680 504 aa17.31■□□□□ 0.36
CNN1-201ENST00000252456 MAP3K12Q12852 859 aa17.31■□□□□ 0.36
CNN1-201ENST00000252456 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
CNN1-201ENST00000252456 IREB2P48200 963 aaKnown RBP17.3■□□□□ 0.36
CNN1-201ENST00000252456 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
CNN1-201ENST00000252456 PICALMQ13492 652 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms