RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 NSUN4Q96CB9 384 aaKnown RBP29.75■■■□□ 2.35
SDF2L1-201ENST00000248958 SNRKQ9NRH2 765 aa29.75■■■□□ 2.35
SDF2L1-201ENST00000248958 MAST2Q6P0Q8 1798 aa29.75■■■□□ 2.35
SDF2L1-201ENST00000248958 MAP2K1Q02750 393 aaPredicted RBP29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 NOGQ13253 232 aa29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 MAP3K11Q16584 847 aa29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 NBPF12Q5TAG4 269 aaPredicted RBP29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 CDC42EP5Q6NZY7 148 aa29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 USP40Q9NVE5 1235 aa29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 PCDHB15Q9Y5E8 787 aa29.74■■■□□ 2.35
SDF2L1-201ENST00000248958 UNCXA6NJT0 531 aa29.73■■■□□ 2.35
SDF2L1-201ENST00000248958 CYP2E1P05181 493 aaPredicted RBP29.73■■■□□ 2.35
SDF2L1-201ENST00000248958 ZAP70P43403 619 aa29.73■■■□□ 2.35
SDF2L1-201ENST00000248958 HOOK2Q96ED9 719 aa29.73■■■□□ 2.35
SDF2L1-201ENST00000248958 TEPSINQ96N21 525 aa29.73■■■□□ 2.35
SDF2L1-201ENST00000248958 ANGEL1Q9UNK9 670 aaKnown RBP29.73■■■□□ 2.35
SDF2L1-201ENST00000248958 RPAP1Q9BWH6 1393 aaPredicted RBP29.73■■■□□ 2.35
SDF2L1-201ENST00000248958 UBE2Q2LH0YL09 131 aa29.72■■■□□ 2.35
SDF2L1-201ENST00000248958 MAP4K4O95819 1239 aaPredicted RBP29.72■■■□□ 2.35
SDF2L1-201ENST00000248958 CACNB3P54284 484 aa29.72■■■□□ 2.35
SDF2L1-201ENST00000248958 SSC5DA1L4H1 1573 aa29.72■■■□□ 2.35
SDF2L1-201ENST00000248958 GPR75-ASB3A0A0A6YYF3 556 aa29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 SLC10A3P09131 477 aa29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 HSPA1AP0DMV8 641 aaKnown RBP29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 HSPA1BP0DMV9 641 aaKnown RBP29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 PRKG1Q13976 671 aa29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 MOB2Q70IA6 237 aa29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 FAM151AQ8WW52 585 aa29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 TMEM39BQ9GZU3 492 aa29.71■■■□□ 2.35
SDF2L1-201ENST00000248958 FAM155AB1AL88 458 aaPredicted RBP29.7■■■□□ 2.35
SDF2L1-201ENST00000248958 BTDP43251 543 aa29.7■■■□□ 2.35
SDF2L1-201ENST00000248958 IREB2P48200 963 aaKnown RBP29.7■■■□□ 2.35
SDF2L1-201ENST00000248958 TMED8Q6PL24 325 aaPredicted RBP29.7■■■□□ 2.35
SDF2L1-201ENST00000248958 LDLRAD1Q5T700 205 aa29.69■■■□□ 2.34
SDF2L1-201ENST00000248958 NAA16Q6N069 864 aaPredicted RBP29.69■■■□□ 2.34
SDF2L1-201ENST00000248958 ZNF384Q8TF68 577 aa29.69■■■□□ 2.34
SDF2L1-201ENST00000248958 IDI2Q9BXS1 227 aa29.69■■■□□ 2.34
SDF2L1-201ENST00000248958 SUPT16HQ9Y5B9 1047 aaKnown RBP29.69■■■□□ 2.34
SDF2L1-201ENST00000248958 MYO5AQ9Y4I1 1855 aaKnown RBP29.69■■■□□ 2.34
SDF2L1-201ENST00000248958 AOC2O75106 756 aa29.68■■■□□ 2.34
SDF2L1-201ENST00000248958 TTF1Q15361 905 aaPredicted RBP29.68■■■□□ 2.34
SDF2L1-201ENST00000248958 RASAL3Q86YV0 1011 aa29.68■■■□□ 2.34
SDF2L1-201ENST00000248958 AIDAQ96BJ3 306 aa29.68■■■□□ 2.34
SDF2L1-201ENST00000248958 NOL10Q9BSC4 688 aaKnown RBP29.68■■■□□ 2.34
SDF2L1-201ENST00000248958 WBP1LQ9NX94 342 aa29.68■■■□□ 2.34
SDF2L1-201ENST00000248958 DOCK2Q92608 1830 aa29.67■■■□□ 2.34
SDF2L1-201ENST00000248958 ENTPD3O75355 529 aa29.67■■■□□ 2.34
SDF2L1-201ENST00000248958 REM2Q8IYK8 340 aaPredicted RBP29.67■■■□□ 2.34
SDF2L1-201ENST00000248958 AK9Q5TCS8 1911 aa29.67■■■□□ 2.34
SDF2L1-201ENST00000248958 USP2O75604 605 aaPredicted RBP29.66■■■□□ 2.34
SDF2L1-201ENST00000248958 COL13A1Q5TAT6 717 aaPredicted RBP29.66■■■□□ 2.34
SDF2L1-201ENST00000248958 BEGAINQ9BUH8 593 aa29.66■■■□□ 2.34
SDF2L1-201ENST00000248958 PIH1D3Q9NQM4 214 aaKnown RBP29.66■■■□□ 2.34
SDF2L1-201ENST00000248958 BAG3O95817 575 aa29.65■■■□□ 2.34
SDF2L1-201ENST00000248958 NFIAQ12857 509 aa29.65■■■□□ 2.34
SDF2L1-201ENST00000248958 ANKRD13AQ8IZ07 590 aa29.65■■■□□ 2.34
SDF2L1-201ENST00000248958 BCL11AQ9H165 835 aa29.65■■■□□ 2.34
SDF2L1-201ENST00000248958 NPM3O75607 178 aaKnown RBP29.64■■■□□ 2.34
SDF2L1-201ENST00000248958 ATP5JP18859 108 aa29.64■■■□□ 2.34
SDF2L1-201ENST00000248958 TCP10Q12799 353 aa29.64■■■□□ 2.34
SDF2L1-201ENST00000248958 MAP3K12Q12852 859 aa29.64■■■□□ 2.34
SDF2L1-201ENST00000248958 DCAF15Q66K64 600 aa29.64■■■□□ 2.34
SDF2L1-201ENST00000248958 FAM198AQ9UFP1 575 aa29.64■■■□□ 2.34
SDF2L1-201ENST00000248958 SMARCA5O60264 1052 aaPredicted RBP29.63■■■□□ 2.33
SDF2L1-201ENST00000248958 PLCG2P16885 1265 aa29.63■■■□□ 2.33
SDF2L1-201ENST00000248958 RHBDL3P58872 404 aa29.63■■■□□ 2.33
SDF2L1-201ENST00000248958 HDAC1Q13547 482 aaPredicted RBP29.63■■■□□ 2.33
SDF2L1-201ENST00000248958 CDAN1Q8IWY9 1227 aa29.63■■■□□ 2.33
SDF2L1-201ENST00000248958 FZD1Q9UP38 647 aa29.63■■■□□ 2.33
SDF2L1-201ENST00000248958 RFX7Q2KHR2 1363 aa29.63■■■□□ 2.33
SDF2L1-201ENST00000248958 IDH1O75874 414 aaKnown RBP29.62■■■□□ 2.33
SDF2L1-201ENST00000248958 RGS3P49796 1198 aa29.62■■■□□ 2.33
SDF2L1-201ENST00000248958 SLC10A4Q96EP9 437 aa29.62■■■□□ 2.33
SDF2L1-201ENST00000248958 WDHD1O75717 1129 aaPredicted RBP29.61■■■□□ 2.33
SDF2L1-201ENST00000248958 PPP4CP60510 307 aa29.61■■■□□ 2.33
SDF2L1-201ENST00000248958 KIF23Q02241 960 aaPredicted RBP29.61■■■□□ 2.33
SDF2L1-201ENST00000248958 CERS3Q8IU89 383 aa29.61■■■□□ 2.33
SDF2L1-201ENST00000248958 GCC1Q96CN9 775 aa29.61■■■□□ 2.33
SDF2L1-201ENST00000248958 ANTXR1Q9H6X2 564 aa29.61■■■□□ 2.33
SDF2L1-201ENST00000248958 CA12O43570 354 aa29.6■■■□□ 2.33
SDF2L1-201ENST00000248958 GPATCH3Q96I76 525 aa29.6■■■□□ 2.33
SDF2L1-201ENST00000248958 NDUFB9Q9Y6M9 179 aa29.6■■■□□ 2.33
SDF2L1-201ENST00000248958 OTOFQ9HC10 1997 aa29.6■■■□□ 2.33
SDF2L1-201ENST00000248958 CYP7A1P22680 504 aa29.59■■■□□ 2.33
SDF2L1-201ENST00000248958 MAP3K9P80192 1104 aa29.59■■■□□ 2.33
SDF2L1-201ENST00000248958 DNAJC2Q99543 621 aaKnown RBP29.59■■■□□ 2.33
SDF2L1-201ENST00000248958 ZBTB47Q9UFB7 747 aaPredicted RBP29.59■■■□□ 2.33
SDF2L1-201ENST00000248958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.58■■■□□ 2.33
SDF2L1-201ENST00000248958 EXOC6Q8TAG9 804 aa29.58■■■□□ 2.33
SDF2L1-201ENST00000248958 ZIC5Q96T25 663 aa29.58■■■□□ 2.33
SDF2L1-201ENST00000248958 HAUS7Q99871 368 aa29.58■■■□□ 2.33
SDF2L1-201ENST00000248958 ZNF341Q9BYN7 854 aa29.58■■■□□ 2.33
SDF2L1-201ENST00000248958 BOLA2Q9H3K6 86 aa29.58■■■□□ 2.33
SDF2L1-201ENST00000248958 ECHDC1Q9NTX5 307 aa29.58■■■□□ 2.33
SDF2L1-201ENST00000248958 AATFQ9NY61 560 aaKnown RBP eCLIP29.58■■■□□ 2.336e-9■□□□□ 8.6
SDF2L1-201ENST00000248958 ZBTB48P10074 688 aaPredicted RBP29.57■■■□□ 2.32
SDF2L1-201ENST00000248958 CTCFP49711 727 aaPredicted RBP29.57■■■□□ 2.32
SDF2L1-201ENST00000248958 TEX11Q8IYF3 940 aa29.57■■■□□ 2.32
SDF2L1-201ENST00000248958 MAGEB6Q8N7X4 407 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms