RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 AIFM3Q96NN9 605 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 NAT10Q9H0A0 1025 aaKnown RBP16.72■□□□□ 0.27
HIF3A-202ENST00000244303 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 PHLPP1O60346 1717 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 NRAPQ86VF7 1730 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 RXRAP19793 462 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 KIAA1468Q9P260 1216 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 WWC3Q9ULE0 1092 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 DOCK2Q92608 1830 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 SH2B2O14492 632 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-202ENST00000244303 PDE6AP16499 860 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 ARID4AP29374 1257 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-202ENST00000244303 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
HIF3A-202ENST00000244303 ANO1Q5XXA6 986 aa16.71■□□□□ 0.27
HIF3A-202ENST00000244303 B4E1Z4 1266 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
HIF3A-202ENST00000244303 DPCR1Q3MIW9 517 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 SENP2Q9HC62 589 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 PRDM10Q9NQV6 1147 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 TNNT1P13805 278 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 SIK1P57059 783 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-202ENST00000244303 ALG1Q9BT22 464 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 PRDM4Q9UKN5 801 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 TAOK2Q9UL54 1235 aa16.7■□□□□ 0.26
HIF3A-202ENST00000244303 LRP5O75197 1615 aa16.69■□□□□ 0.26
HIF3A-202ENST00000244303 ZNF202O95125 648 aa16.69■□□□□ 0.26
HIF3A-202ENST00000244303 CDC27P30260 824 aa16.69■□□□□ 0.26
HIF3A-202ENST00000244303 ZRSR1Q15695 479 aaKnown RBP16.69■□□□□ 0.26
HIF3A-202ENST00000244303 TPD52L1Q16890 204 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-202ENST00000244303 AXDND1Q5T1B0 1012 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-202ENST00000244303 APOA5Q6Q788 366 aa16.69■□□□□ 0.26
HIF3A-202ENST00000244303 FILIP1Q7Z7B0 1213 aa16.69■□□□□ 0.26
HIF3A-202ENST00000244303 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
HIF3A-202ENST00000244303 CTIFO43310 598 aaKnown RBP16.68■□□□□ 0.26
HIF3A-202ENST00000244303 NEMFO60524 1076 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 PFKFB1P16118 471 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 ITPK1Q13572 414 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 MICU3Q86XE3 530 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 PHKBQ93100 1093 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 SLIT2O94813 1529 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 WDHD1O75717 1129 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-202ENST00000244303 SLC3A2P08195 630 aaKnown RBP16.68■□□□□ 0.26
HIF3A-202ENST00000244303 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 MARCKSP29966 332 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-202ENST00000244303 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
HIF3A-202ENST00000244303 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 AIDAQ96BJ3 306 aa16.68■□□□□ 0.26
HIF3A-202ENST00000244303 STRBPQ96SI9 672 aaKnown RBP16.68■□□□□ 0.26
HIF3A-202ENST00000244303 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 BIN1O00499 593 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 CDKL5O76039 1030 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 CMA1P23946 247 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 RBM6P78332 1123 aaKnown RBP16.67■□□□□ 0.26
HIF3A-202ENST00000244303 KRT40Q6A162 431 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 BARGINQ6ZT62 677 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 LPIN2Q92539 896 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 AK7Q96M32 723 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 SMTNL1A8MU46 457 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 SKILP12757 684 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 FGFR2P21802 821 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 SLC39A14Q15043 492 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 RGS22Q8NE09 1264 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 IGDCC4Q8TDY8 1250 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 TMEM87BQ96K49 555 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 BPIFA3Q9BQP9 254 aa16.67■□□□□ 0.26
HIF3A-202ENST00000244303 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 CCZ1BP86790 482 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 CCZ1P86791 482 aaPredicted RBP16.66■□□□□ 0.26
HIF3A-202ENST00000244303 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 UTP14AQ9BVJ6 771 aaKnown RBP16.66■□□□□ 0.26
HIF3A-202ENST00000244303 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 EPB41L4AQ9HCS5 686 aaPredicted RBP16.66■□□□□ 0.26
HIF3A-202ENST00000244303 MROH5Q6ZUA9 1318 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 ZBTB43O43298 467 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 NLRP12P59046 1061 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 PIP4K2BP78356 416 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 CPLX2Q6PUV4 134 aaKnown RBP16.66■□□□□ 0.26
HIF3A-202ENST00000244303 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
HIF3A-202ENST00000244303 SNAP23O00161 211 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 RANBP6O60518 1105 aaKnown RBP16.65■□□□□ 0.26
HIF3A-202ENST00000244303 GNL2Q13823 731 aaKnown RBP16.65■□□□□ 0.26
HIF3A-202ENST00000244303 NTRK3Q16288 839 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 GOLGA8AA7E2F4 631 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 PATL2C9JE40 543 aaKnown RBP16.65■□□□□ 0.26
HIF3A-202ENST00000244303 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
HIF3A-202ENST00000244303 CTDSPL2Q05D32 466 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 ALX1Q15699 326 aa16.65■□□□□ 0.26
HIF3A-202ENST00000244303 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms