RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 GPR75-ASB3A0A0A6YYF3 556 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-201ENST00000243040 LDHCP07864 332 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 HUNKP57058 714 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 TMED8Q6PL24 325 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-201ENST00000243040 GCC1Q96CN9 775 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 TEPSINQ96N21 525 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 PIH1D3Q9NQM4 214 aaKnown RBP12.97□□□□□ -0.33
PFDN5-201ENST00000243040 RAI14Q9P0K7 980 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 LRP2BPQ9P2M1 347 aa12.97□□□□□ -0.33
PFDN5-201ENST00000243040 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-201ENST00000243040 ATP5JP18859 108 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 ECE1P42892 770 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 BTDP43251 543 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 VEGFBP49765 207 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 TTF1Q15361 905 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-201ENST00000243040 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 SUPT20HL1Q3ZLR7 823 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 IDI2Q9BXS1 227 aa12.96□□□□□ -0.33
PFDN5-201ENST00000243040 COL2A1P02458 1487 aaPredicted RBP12.96□□□□□ -0.34
PFDN5-201ENST00000243040 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.34
PFDN5-201ENST00000243040 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
PFDN5-201ENST00000243040 CACNB3P54284 484 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 RHBDL3P58872 404 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 NBPF12Q5TAG4 269 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-201ENST00000243040 NAA16Q6N069 864 aaPredicted RBP12.95□□□□□ -0.34
PFDN5-201ENST00000243040 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 FAM151AQ8WW52 585 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 CAPNS2Q96L46 248 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 NDUFB9Q9Y6M9 179 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
PFDN5-201ENST00000243040 SALL3Q9BXA9 1300 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
PFDN5-201ENST00000243040 NFIAQ12857 509 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 RGMBQ6NW40 437 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 ARMC9Q7Z3E5 817 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 HAUS7Q99871 368 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 ECHDC1Q9NTX5 307 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 USP40Q9NVE5 1235 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 FAM198AQ9UFP1 575 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 MYH1P12882 1939 aa12.94□□□□□ -0.34
PFDN5-201ENST00000243040 TTC41PQ6P2S7 1318 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 PPP1R12BO60237 982 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-201ENST00000243040 ENTPD3O75355 529 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-201ENST00000243040 IDH1O75874 414 aaKnown RBP12.93□□□□□ -0.34
PFDN5-201ENST00000243040 SLC10A3P09131 477 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 PPP4CP60510 307 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 MAP3K12Q12852 859 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 LDLRAD1Q5T700 205 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 MOB2Q70IA6 237 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 DNAJC2Q99543 621 aaKnown RBP12.93□□□□□ -0.34
PFDN5-201ENST00000243040 BOLA2Q9H3K6 86 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-201ENST00000243040 PAG1Q9NWQ8 432 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 ATRNL1Q5VV63 1379 aa12.93□□□□□ -0.34
PFDN5-201ENST00000243040 FAM155AB1AL88 458 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-201ENST00000243040 GOLIM4O00461 696 aa12.92□□□□□ -0.34
PFDN5-201ENST00000243040 RGS3P49796 1198 aa12.92□□□□□ -0.34
PFDN5-201ENST00000243040 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-201ENST00000243040 PAXIP1Q6ZW49 1069 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-201ENST00000243040 ADGRA1Q86SQ6 560 aa12.92□□□□□ -0.34
PFDN5-201ENST00000243040 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
PFDN5-201ENST00000243040 CERS3Q8IU89 383 aa12.92□□□□□ -0.34
PFDN5-201ENST00000243040 CCDC102AQ96A19 550 aa12.92□□□□□ -0.34
PFDN5-201ENST00000243040 NOL10Q9BSC4 688 aaKnown RBP12.92□□□□□ -0.34
PFDN5-201ENST00000243040 BCL11AQ9H165 835 aa12.92□□□□□ -0.34
PFDN5-201ENST00000243040 ANGEL1Q9UNK9 670 aaKnown RBP12.92□□□□□ -0.34
PFDN5-201ENST00000243040 DOCK1Q14185 1865 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 ATAD5Q96QE3 1844 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 UBE2Q2LH0YL09 131 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 BAG3O95817 575 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 IGHDP01880 384 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 PLCG2P16885 1265 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 CYP7A1P22680 504 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 MAP2K2P36507 400 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
PFDN5-201ENST00000243040 ZNF157P51786 506 aaPredicted RBP12.91□□□□□ -0.34
PFDN5-201ENST00000243040 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
PFDN5-201ENST00000243040 NOGQ13253 232 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 ANKRD45Q5TZF3 282 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 MAGEB6Q8N7X4 407 aa12.91□□□□□ -0.34
PFDN5-201ENST00000243040 EDC3Q96F86 508 aaKnown RBP12.91□□□□□ -0.34
PFDN5-201ENST00000243040 DDX4Q9NQI0 724 aaKnown RBP12.91□□□□□ -0.34
PFDN5-201ENST00000243040 AATFQ9NY61 560 aaKnown RBP eCLIP12.91□□□□□ -0.34
PFDN5-201ENST00000243040 USP2O75604 605 aaPredicted RBP12.9□□□□□ -0.34
PFDN5-201ENST00000243040 PDE6AP16499 860 aa12.9□□□□□ -0.34
PFDN5-201ENST00000243040 MX1P20591 662 aa12.9□□□□□ -0.34
PFDN5-201ENST00000243040 TCP10Q12799 353 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms