RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 MINDY4BA8MYZ0 360 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
SYDE2-201ENST00000234668 RANBP6O60518 1105 aaKnown RBP10.62□□□□□ -0.71
SYDE2-201ENST00000234668 SLC3A2P08195 630 aaKnown RBP10.62□□□□□ -0.71
SYDE2-201ENST00000234668 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
SYDE2-201ENST00000234668 IFNL3Q8IZI9 196 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 SPATA5Q8NB90 893 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 PRIMPOLQ96LW4 560 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 TEX13AQ9BXU3 409 aaPredicted RBP10.62□□□□□ -0.71
SYDE2-201ENST00000234668 IFNKQ9P0W0 207 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 FOXN1O15353 648 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 ZBTB43O43298 467 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 ATP1A3P13637 1013 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 GRIN1Q05586 938 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 PNOCQ13519 176 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 CEP57L1Q8IYX8 460 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 LCORLQ8N3X6 602 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 SDR42E1Q8WUS8 393 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 PLA2G12BQ9BX93 195 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 JAG2Q9Y219 1238 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 CYP2D7A0A087X1C5 515 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 SH2B2O14492 632 aaPredicted RBP10.61□□□□□ -0.71
SYDE2-201ENST00000234668 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 EVCP57679 992 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 AXDND1Q5T1B0 1012 aaPredicted RBP10.61□□□□□ -0.71
SYDE2-201ENST00000234668 IGDCC4Q8TDY8 1250 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 FAM217BQ9NTX9 383 aaPredicted RBP10.61□□□□□ -0.71
SYDE2-201ENST00000234668 BTBD18B2RXH4 712 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 CTAGE5O15320 804 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 PRDM1O75626 825 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 IARSP41252 1262 aaKnown RBP10.61□□□□□ -0.71
SYDE2-201ENST00000234668 TDO2P48775 406 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 EVX2Q03828 476 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 PDILTQ8N807 584 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 XPO4Q9C0E2 1151 aaKnown RBP10.61□□□□□ -0.71
SYDE2-201ENST00000234668 LMTK3Q96Q04 1460 aa10.61□□□□□ -0.71
SYDE2-201ENST00000234668 TCRBV5S4A2TA0A5A2 114 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 NUTM2BA6NNL0 878 aaPredicted RBP10.6□□□□□ -0.71
SYDE2-201ENST00000234668 NUTM2EB1AL46 878 aaPredicted RBP10.6□□□□□ -0.71
SYDE2-201ENST00000234668 TPM3P06753 285 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 DCCP43146 1447 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 TMC6Q7Z403 805 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 NUTM2AQ8IVF1 878 aaPredicted RBP10.6□□□□□ -0.71
SYDE2-201ENST00000234668 LRP2BPQ9P2M1 347 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 SLC4A4Q9Y6R1 1079 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 TJP1Q07157 1748 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 PKD1L3Q7Z443 1732 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 TNS2Q63HR2 1409 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 GYG1P46976 350 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 PUM3Q15397 648 aaKnown RBP10.6□□□□□ -0.71
SYDE2-201ENST00000234668 SHC4Q6S5L8 630 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 KCNG4Q8TDN1 519 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 LPIN2Q92539 896 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 LY9Q9HBG7 655 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 NIP7Q9Y221 180 aaKnown RBP eCLIP10.6□□□□□ -0.71
SYDE2-201ENST00000234668 SLC12A7Q9Y666 1083 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 GSG1L2A8MUP6 293 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 KCNQ2O43526 872 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 SYKP43405 635 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 NR5A1Q13285 461 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 ADGRA1Q86SQ6 560 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 NBPF11Q86T75 865 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 GRAMD1CQ8IYS0 662 aa10.6□□□□□ -0.71
SYDE2-201ENST00000234668 IGSF3O75054 1194 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 UBE3CQ15386 1083 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 LONRF3Q496Y0 759 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
SYDE2-201ENST00000234668 ZMYM6O95789 1325 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 PATL2C9JE40 543 aaKnown RBP10.59□□□□□ -0.71
SYDE2-201ENST00000234668 U2AF2P26368 475 aaKnown RBP eCLIP10.59□□□□□ -0.713e-9■■■□□ 15.2
SYDE2-201ENST00000234668 CRKLP46109 303 aaKnown RBP10.59□□□□□ -0.71
SYDE2-201ENST00000234668 MAP3K12Q12852 859 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 TTF1Q15361 905 aaPredicted RBP10.59□□□□□ -0.71
SYDE2-201ENST00000234668 NTRK3Q16288 839 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 ZNF827Q17R98 1081 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 C3orf67Q6ZVT6 689 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 FOXP4Q8IVH2 680 aaPredicted RBP10.59□□□□□ -0.71
SYDE2-201ENST00000234668 DPF2Q92785 391 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
SYDE2-201ENST00000234668 MYO5AQ9Y4I1 1855 aaKnown RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 SLC5A1P13866 664 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 SLC39A14Q15043 492 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 INTS5Q6P9B9 1019 aaKnown RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 MFSD6Q6ZSS7 791 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 ZNF34Q8IZ26 560 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 NWD2Q9ULI1 1742 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 YEATS4O95619 227 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 FGFR2P21802 821 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 ITPK1Q13572 414 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 TRIM29Q14134 588 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.58□□□□□ -0.72
SYDE2-201ENST00000234668 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
SYDE2-201ENST00000234668 RAI14Q9P0K7 980 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms