RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ANGEL2Q5VTE6 544 aaKnown RBP13.81□□□□□ -0.2
SF3B6-201ENST00000233468 PRAMEF18Q5VWM3 479 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 SPTY2D1Q68D10 685 aaPredicted RBP13.81□□□□□ -0.2
SF3B6-201ENST00000233468 AACSQ86V21 672 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 DCTPP1Q9H773 170 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 APBB1O00213 710 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 IGSF3O75054 1194 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 HDLBPQ00341 1268 aaKnown RBP13.8□□□□□ -0.2
SF3B6-201ENST00000233468 MOB2Q70IA6 237 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 SLF2Q8IX21 1173 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 ZNF512BQ96KM6 892 aaPredicted RBP13.8□□□□□ -0.2
SF3B6-201ENST00000233468 CSRNP1Q96S65 589 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 RWDD1Q9H446 243 aaPredicted RBP13.8□□□□□ -0.2
SF3B6-201ENST00000233468 RNF186Q9NXI6 227 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 TTF2Q9UNY4 1162 aaKnown RBP13.8□□□□□ -0.2
SF3B6-201ENST00000233468 PCDHB15Q9Y5E8 787 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
SF3B6-201ENST00000233468 F8W031 263 aaPredicted RBP13.79□□□□□ -0.2
SF3B6-201ENST00000233468 LDHBP07195 334 aaKnown RBP13.79□□□□□ -0.2
SF3B6-201ENST00000233468 SLC10A3P09131 477 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 ARID4AP29374 1257 aaPredicted RBP13.79□□□□□ -0.2
SF3B6-201ENST00000233468 RBM5P52756 815 aaKnown RBP eCLIP13.79□□□□□ -0.2
SF3B6-201ENST00000233468 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
SF3B6-201ENST00000233468 CERS5Q8N5B7 392 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 CCDC102AQ96A19 550 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 EAF2Q96CJ1 260 aaPredicted RBP13.79□□□□□ -0.2
SF3B6-201ENST00000233468 GCC1Q96CN9 775 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 CCDC8Q9H0W5 538 aaPredicted RBP13.79□□□□□ -0.2
SF3B6-201ENST00000233468 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 PCDHB13Q9Y5F0 798 aa13.79□□□□□ -0.2
SF3B6-201ENST00000233468 RASGRF1Q13972 1273 aa13.78□□□□□ -0.2
SF3B6-201ENST00000233468 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
SF3B6-201ENST00000233468 SPATA5Q8NB90 893 aa13.78□□□□□ -0.2
SF3B6-201ENST00000233468 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
SF3B6-201ENST00000233468 TEKT1Q969V4 418 aa13.78□□□□□ -0.2
SF3B6-201ENST00000233468 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
SF3B6-201ENST00000233468 DBNLQ9UJU6 430 aaKnown RBP13.78□□□□□ -0.2
SF3B6-201ENST00000233468 WNT10BO00744 389 aa13.77□□□□□ -0.21
SF3B6-201ENST00000233468 CFAP100Q494V2 611 aa13.77□□□□□ -0.21
SF3B6-201ENST00000233468 RASAL3Q86YV0 1011 aa13.77□□□□□ -0.21
SF3B6-201ENST00000233468 PITPNM2Q9BZ72 1349 aa13.77□□□□□ -0.21
SF3B6-201ENST00000233468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.21
SF3B6-201ENST00000233468 PAPPA2Q9BXP8 1791 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 UBE2Q2LH0YL09 131 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 CRKP46108 304 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 GSTO1P78417 241 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 HHIPL2Q6UWX4 724 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 DZIP1Q86YF9 867 aaKnown RBP13.76□□□□□ -0.21
SF3B6-201ENST00000233468 APOBEC3FQ8IUX4 373 aaKnown RBP13.76□□□□□ -0.21
SF3B6-201ENST00000233468 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
SF3B6-201ENST00000233468 LDHCP07864 332 aa13.75□□□□□ -0.21
SF3B6-201ENST00000233468 TNFAIP1Q13829 316 aa13.75□□□□□ -0.21
SF3B6-201ENST00000233468 TMED8Q6PL24 325 aaPredicted RBP13.75□□□□□ -0.21
SF3B6-201ENST00000233468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.75□□□□□ -0.21
SF3B6-201ENST00000233468 BCL11AQ9H165 835 aa13.75□□□□□ -0.21
SF3B6-201ENST00000233468 SAGE1Q9NXZ1 904 aa13.75□□□□□ -0.21
SF3B6-201ENST00000233468 TMOD2Q9NZR1 351 aa13.75□□□□□ -0.21
SF3B6-201ENST00000233468 LRP2BPQ9P2M1 347 aa13.75□□□□□ -0.21
SF3B6-201ENST00000233468 PDE4DIPQ5VU43 2346 aa13.75□□□□□ -0.21
SF3B6-201ENST00000233468 MCAMP43121 646 aa13.74□□□□□ -0.21
SF3B6-201ENST00000233468 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
SF3B6-201ENST00000233468 ZBED3Q96IU2 234 aaPredicted RBP13.74□□□□□ -0.21
SF3B6-201ENST00000233468 ZDHHC15Q96MV8 337 aa13.74□□□□□ -0.21
SF3B6-201ENST00000233468 TLR7Q9NYK1 1049 aaKnown RBP13.74□□□□□ -0.21
SF3B6-201ENST00000233468 A0A1B0GUL6 1792 aa13.73□□□□□ -0.21
SF3B6-201ENST00000233468 NEFLP07196 543 aa13.73□□□□□ -0.21
SF3B6-201ENST00000233468 PRDX5P30044 214 aa13.73□□□□□ -0.21
SF3B6-201ENST00000233468 TNNI2P48788 182 aa13.73□□□□□ -0.21
SF3B6-201ENST00000233468 SOX10P56693 466 aa13.73□□□□□ -0.21
SF3B6-201ENST00000233468 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
SF3B6-201ENST00000233468 RAI14Q9P0K7 980 aa13.73□□□□□ -0.21
SF3B6-201ENST00000233468 PPP2R3BQ9Y5P8 575 aa13.73□□□□□ -0.21
SF3B6-201ENST00000233468 SLC34A2O95436 690 aa13.72□□□□□ -0.21
SF3B6-201ENST00000233468 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
SF3B6-201ENST00000233468 NF2P35240 595 aa13.72□□□□□ -0.21
SF3B6-201ENST00000233468 ANKRD45Q5TZF3 282 aa13.72□□□□□ -0.21
SF3B6-201ENST00000233468 PRMT6Q96LA8 375 aaPredicted RBP13.72□□□□□ -0.21
SF3B6-201ENST00000233468 NOL10Q9BSC4 688 aaKnown RBP13.72□□□□□ -0.21
SF3B6-201ENST00000233468 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
SF3B6-201ENST00000233468 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
SF3B6-201ENST00000233468 ERC2O15083 957 aa13.71□□□□□ -0.21
SF3B6-201ENST00000233468 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
SF3B6-201ENST00000233468 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.21
SF3B6-201ENST00000233468 ATP5JP18859 108 aa13.71□□□□□ -0.21
SF3B6-201ENST00000233468 ZAP70P43403 619 aa13.71□□□□□ -0.21
SF3B6-201ENST00000233468 IRX6P78412 446 aaPredicted RBP13.71□□□□□ -0.21
SF3B6-201ENST00000233468 MAP3K12Q12852 859 aa13.71□□□□□ -0.21
SF3B6-201ENST00000233468 PRKG1Q13976 671 aa13.71□□□□□ -0.21
SF3B6-201ENST00000233468 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
SF3B6-201ENST00000233468 VEZTQ9HBM0 779 aa13.71□□□□□ -0.21
SF3B6-201ENST00000233468 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
SF3B6-201ENST00000233468 PCDHAC2Q9Y5I4 1007 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms