RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 HMG20BQ9P0W2 317 aa17.53■□□□□ 0.4
GPN3-201ENST00000228827 PDS5AQ29RF7 1337 aaKnown RBP17.53■□□□□ 0.4
GPN3-201ENST00000228827 MANSC4A6NHS7 340 aaPredicted RBP17.52■□□□□ 0.4
GPN3-201ENST00000228827 ZBTB22O15209 634 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 MAP3K9P80192 1104 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 VGLL4Q14135 290 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 SPTY2D1Q68D10 685 aaPredicted RBP17.52■□□□□ 0.4
GPN3-201ENST00000228827 CEP85Q6P2H3 762 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.52■□□□□ 0.4
GPN3-201ENST00000228827 TBC1D9Q6ZT07 1266 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 SPATA5Q8NB90 893 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.52■□□□□ 0.4
GPN3-201ENST00000228827 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 OPTNQ96CV9 577 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
GPN3-201ENST00000228827 MS4A1P11836 297 aa17.51■□□□□ 0.39
GPN3-201ENST00000228827 ARID4AP29374 1257 aaPredicted RBP17.51■□□□□ 0.39
GPN3-201ENST00000228827 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
GPN3-201ENST00000228827 MIGA2Q7L4E1 593 aa17.51■□□□□ 0.39
GPN3-201ENST00000228827 FAM151AQ8WW52 585 aa17.51■□□□□ 0.39
GPN3-201ENST00000228827 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
GPN3-201ENST00000228827 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
GPN3-201ENST00000228827 CSADQ9Y600 493 aa17.51■□□□□ 0.39
GPN3-201ENST00000228827 MCAMP43121 646 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 MECOMQ03112 1051 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 TTC39AQ5SRH9 613 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 WRNIP1Q96S55 665 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 R3HDMLQ9H3Y0 253 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 GPR108Q9NPR9 543 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 FAM198AQ9UFP1 575 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 GAKO14976 1311 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 MYH13Q9UKX3 1938 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 UQCRFS1P1P0C7P4 283 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 BTDP43251 543 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 INHBEP58166 350 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 IFNL1Q8IU54 200 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 ZFPM1Q8IX07 1006 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 SLF2Q8IX21 1173 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 ZKSCAN4Q969J2 545 aaPredicted RBP17.5■□□□□ 0.39
GPN3-201ENST00000228827 HOOK2Q96ED9 719 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 SNRKQ9NRH2 765 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
GPN3-201ENST00000228827 NOP58Q9Y2X3 529 aaKnown RBP17.5■□□□□ 0.39
GPN3-201ENST00000228827 RPAP1Q9BWH6 1393 aaPredicted RBP17.49■□□□□ 0.39
GPN3-201ENST00000228827 CCDC85CA6NKD9 419 aa17.49■□□□□ 0.39
GPN3-201ENST00000228827 IGF2BP3O00425 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
GPN3-201ENST00000228827 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
GPN3-201ENST00000228827 DCAF15Q66K64 600 aa17.49■□□□□ 0.39
GPN3-201ENST00000228827 ZNF296Q8WUU4 475 aaPredicted RBP17.49■□□□□ 0.39
GPN3-201ENST00000228827 OTUD5Q96G74 571 aa17.49■□□□□ 0.39
GPN3-201ENST00000228827 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
GPN3-201ENST00000228827 GPR25O00155 361 aa17.48■□□□□ 0.39
GPN3-201ENST00000228827 ALDH1A1P00352 501 aa17.48■□□□□ 0.39
GPN3-201ENST00000228827 ZNF384Q8TF68 577 aa17.48■□□□□ 0.39
GPN3-201ENST00000228827 ZNF341Q9BYN7 854 aa17.48■□□□□ 0.39
GPN3-201ENST00000228827 CCDC8Q9H0W5 538 aaPredicted RBP17.48■□□□□ 0.39
GPN3-201ENST00000228827 TLR7Q9NYK1 1049 aaKnown RBP17.48■□□□□ 0.39
GPN3-201ENST00000228827 EXOC6BQ9Y2D4 811 aa17.48■□□□□ 0.39
GPN3-201ENST00000228827 RGS3P49796 1198 aa17.47■□□□□ 0.39
GPN3-201ENST00000228827 PICALMQ13492 652 aa17.47■□□□□ 0.39
GPN3-201ENST00000228827 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
GPN3-201ENST00000228827 LRP2BPQ9P2M1 347 aa17.47■□□□□ 0.39
GPN3-201ENST00000228827 SNCAIPQ9Y6H5 919 aa17.47■□□□□ 0.39
GPN3-201ENST00000228827 INPP5BP32019 993 aa17.46■□□□□ 0.39
GPN3-201ENST00000228827 CTU1Q7Z7A3 348 aaKnown RBP17.46■□□□□ 0.39
GPN3-201ENST00000228827 NSUN4Q96CB9 384 aaKnown RBP17.46■□□□□ 0.39
GPN3-201ENST00000228827 EAF2Q96CJ1 260 aaPredicted RBP17.46■□□□□ 0.39
GPN3-201ENST00000228827 PTPN18Q99952 460 aa17.46■□□□□ 0.39
GPN3-201ENST00000228827 DBNLQ9UJU6 430 aaKnown RBP17.46■□□□□ 0.39
GPN3-201ENST00000228827 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
GPN3-201ENST00000228827 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
GPN3-201ENST00000228827 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
GPN3-201ENST00000228827 GSTO1P78417 241 aa17.45■□□□□ 0.38
GPN3-201ENST00000228827 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
GPN3-201ENST00000228827 ZSCAN29Q8IWY8 852 aaPredicted RBP17.45■□□□□ 0.38
GPN3-201ENST00000228827 MS4A4AQ96JQ5 239 aa17.45■□□□□ 0.38
GPN3-201ENST00000228827 IDI2Q9BXS1 227 aa17.45■□□□□ 0.38
GPN3-201ENST00000228827 DDX4Q9NQI0 724 aaKnown RBP17.45■□□□□ 0.38
GPN3-201ENST00000228827 AKAP11Q9UKA4 1901 aa17.45■□□□□ 0.38
GPN3-201ENST00000228827 OTOFQ9HC10 1997 aa17.45■□□□□ 0.38
GPN3-201ENST00000228827 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 CCL15-CCL14A0A0B4J2E2 113 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 TESPA1A2RU30 521 aaPredicted RBP17.44■□□□□ 0.38
GPN3-201ENST00000228827 SPDYE5A6NIY4 337 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 APBB1O00213 710 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 FKTNO75072 461 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 LDHCP07864 332 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 GTF2A2P52657 109 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 CCL15Q16663 113 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 OTUD7BQ6GQQ9 843 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 BRI3BPQ8WY22 251 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 CFHR5Q9BXR6 569 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 BCL11AQ9H165 835 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 ENTPD3O75355 529 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 ZAP70P43403 619 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 RHBDL3P58872 404 aa17.44■□□□□ 0.38
GPN3-201ENST00000228827 SH3BP5LQ7L8J4 393 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms