RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ADORA1P30542 326 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 EPHA10Q5JZY3 1008 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 IQCEQ6IPM2 695 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 CCDC24Q8N4L8 307 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 KRT23Q9C075 422 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 TAF6LQ9Y6J9 622 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 ZEB2O60315 1214 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 TXLNBQ8N3L3 684 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 PLBD2Q8NHP8 589 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 TDRD7Q8NHU6 1098 aaKnown RBP15.62■□□□□ 0.09
NFKB1-201ENST00000226574 SLF1Q9BQI6 1058 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 SLC52A2Q9HAB3 445 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 PCDHA5Q9Y5H7 936 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
NFKB1-201ENST00000226574 TBX22Q9Y458 520 aa15.62■□□□□ 0.09
NFKB1-201ENST00000226574 PFKFB2O60825 505 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 OAS2P29728 719 aaKnown RBP15.61■□□□□ 0.09
NFKB1-201ENST00000226574 CHMP4BP1P59074 171 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 ASIC1P78348 528 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 CLEC17AQ6ZS10 378 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 MAATS1Q7Z4T9 603 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 KAT14Q9H8E8 782 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 TAB2Q9NYJ8 693 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 VPS54Q9P1Q0 977 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 SEC63Q9UGP8 760 aaKnown RBP15.61■□□□□ 0.09
NFKB1-201ENST00000226574 SF3A3Q12874 501 aaKnown RBP eCLIP15.61■□□□□ 0.095e-6■■■■■ 29.5
NFKB1-201ENST00000226574 CCDC40Q4G0X9 1142 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 GRAMD1CQ8IYS0 662 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 CDC42BPAQ5VT25 1732 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 UQCRFS1P1P0C7P4 283 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 CCDC122Q5T0U0 273 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 CTNND2Q9UQB3 1225 aa15.61■□□□□ 0.09
NFKB1-201ENST00000226574 KRT9P35527 623 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 DDIT3P35638 169 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 FBXO18Q8NFZ0 1043 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 EPC1Q9H2F5 836 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 GOPCQ9HD26 462 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 ZNF532Q9HCE3 1301 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 NCBP1Q09161 790 aaKnown RBP15.6■□□□□ 0.09
NFKB1-201ENST00000226574 SIRT1Q96EB6 747 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 MRFAP1L1Q96HT8 127 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 MYOM2P54296 1465 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 TTC14Q96N46 770 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 LUC7L2Q9Y383 392 aaKnown RBP15.6■□□□□ 0.09
NFKB1-201ENST00000226574 IGSF1Q8N6C5 1336 aa15.6■□□□□ 0.09
NFKB1-201ENST00000226574 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 ROBO2Q9HCK4 1378 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 EXOC5O00471 708 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 ARHGAP6O43182 974 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 MNAT1P51948 309 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 ATL3Q6DD88 541 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
NFKB1-201ENST00000226574 AK9Q5TCS8 1911 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 DMTNQ08495 405 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 TOB2Q14106 344 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-201ENST00000226574 POSTNQ15063 836 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 PIK3AP1Q6ZUJ8 805 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 CCDC42Q96M95 316 aa15.59■□□□□ 0.09
NFKB1-201ENST00000226574 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
NFKB1-201ENST00000226574 FBXO38Q6PIJ6 1188 aa15.58■□□□□ 0.09
NFKB1-201ENST00000226574 SMYD4Q8IYR2 804 aaPredicted RBP15.58■□□□□ 0.09
NFKB1-201ENST00000226574 MICALL1Q8N3F8 863 aa15.58■□□□□ 0.09
NFKB1-201ENST00000226574 CNNM2Q9H8M5 875 aa15.58■□□□□ 0.09
NFKB1-201ENST00000226574 BABAM1Q9NWV8 329 aa15.58■□□□□ 0.09
NFKB1-201ENST00000226574 SMC1AQ14683 1233 aaKnown RBP15.58■□□□□ 0.08
NFKB1-201ENST00000226574 SYCP1Q15431 976 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 CEP112Q8N8E3 955 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 IFT81Q8WYA0 676 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 CTAGE1Q96RT6 745 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 HAUS7Q99871 368 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 ARHGEF10O15013 1369 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 ADCY10Q96PN6 1610 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 PSMA7O14818 248 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 GYS2P54840 703 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 GABPB1Q06547 395 aaPredicted RBP15.58■□□□□ 0.08
NFKB1-201ENST00000226574 POLA2Q14181 598 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 DZIP3Q86Y13 1208 aaKnown RBP15.58■□□□□ 0.08
NFKB1-201ENST00000226574 ATRIPQ8WXE1 791 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 PLXNC1O60486 1568 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 KCNF1Q9H3M0 494 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 EXOC1Q9NV70 894 aa15.58■□□□□ 0.08
NFKB1-201ENST00000226574 ERCC6L2Q5T890 1561 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 AATKQ6ZMQ8 1374 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 ZNF76P36508 570 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 KIF5AQ12840 1032 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 SNAP23O00161 211 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 IFFO1Q0D2I5 559 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 RESTQ13127 1097 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 TMTC2Q8N394 836 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 PPP1R13BQ96KQ4 1090 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 MCM9Q9NXL9 1143 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 IMPACTQ9P2X3 320 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 CYLC1P35663 651 aaPredicted RBP15.57■□□□□ 0.08
NFKB1-201ENST00000226574 RILPL1Q5EBL4 403 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 SPECC1LQ69YQ0 1117 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 OSBP2Q969R2 916 aa15.57■□□□□ 0.08
NFKB1-201ENST00000226574 RCOR1Q9UKL0 485 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms