RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 ARMC9Q7Z3E5 817 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 SMC5Q8IY18 1101 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 XAGE2Q96GT9 111 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 ZDHHC15Q96MV8 337 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
UPK1A-201ENST00000222275 NF2P35240 595 aa16.67■□□□□ 0.26
UPK1A-201ENST00000222275 AACSQ86V21 672 aa16.67■□□□□ 0.26
UPK1A-201ENST00000222275 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
UPK1A-201ENST00000222275 ABHD8Q96I13 439 aa16.67■□□□□ 0.26
UPK1A-201ENST00000222275 IL1RAPL2Q9NP60 686 aa16.67■□□□□ 0.26
UPK1A-201ENST00000222275 PPP2R3BQ9Y5P8 575 aa16.67■□□□□ 0.26
UPK1A-201ENST00000222275 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 WDR66Q8TBY9 1149 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 ZNF384Q8TF68 577 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 ARAP2Q8WZ64 1704 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
UPK1A-201ENST00000222275 SLC10A4Q96EP9 437 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
UPK1A-201ENST00000222275 HTTP42858 3142 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 IGHDP01880 384 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 RASGRF1Q13972 1273 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 HHIPL2Q6UWX4 724 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
UPK1A-201ENST00000222275 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 CCDC136Q96JN2 1154 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 ZNF512BQ96KM6 892 aaPredicted RBP16.65■□□□□ 0.26
UPK1A-201ENST00000222275 MCOLN1Q9GZU1 580 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 SAGE1Q9NXZ1 904 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 SUGT1Q9Y2Z0 365 aa16.65■□□□□ 0.26
UPK1A-201ENST00000222275 NFIAQ12857 509 aa16.64■□□□□ 0.25
UPK1A-201ENST00000222275 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
UPK1A-201ENST00000222275 PI16Q6UXB8 463 aa16.64■□□□□ 0.25
UPK1A-201ENST00000222275 WNK4Q96J92 1243 aa16.64■□□□□ 0.25
UPK1A-201ENST00000222275 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
UPK1A-201ENST00000222275 PDS5AQ29RF7 1337 aaKnown RBP16.64■□□□□ 0.25
UPK1A-201ENST00000222275 PPP1R12BO60237 982 aaPredicted RBP16.63■□□□□ 0.25
UPK1A-201ENST00000222275 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
UPK1A-201ENST00000222275 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
UPK1A-201ENST00000222275 PTPN18Q99952 460 aa16.63■□□□□ 0.25
UPK1A-201ENST00000222275 DBNDD2Q9BQY9 259 aa16.63■□□□□ 0.25
UPK1A-201ENST00000222275 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
UPK1A-201ENST00000222275 DBNLQ9UJU6 430 aaKnown RBP16.63■□□□□ 0.25
UPK1A-201ENST00000222275 CENPFP49454 3210 aa16.62■□□□□ 0.25
UPK1A-201ENST00000222275 ECM29Q5VYK3 1845 aa16.62■□□□□ 0.25
UPK1A-201ENST00000222275 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
UPK1A-201ENST00000222275 IGSF3O75054 1194 aa16.62■□□□□ 0.25
UPK1A-201ENST00000222275 ARID4AP29374 1257 aaPredicted RBP16.62■□□□□ 0.25
UPK1A-201ENST00000222275 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
UPK1A-201ENST00000222275 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
UPK1A-201ENST00000222275 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
UPK1A-201ENST00000222275 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
UPK1A-201ENST00000222275 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-201ENST00000222275 NUCB1Q02818 461 aa16.61■□□□□ 0.25
UPK1A-201ENST00000222275 DGKZQ13574 1117 aa16.61■□□□□ 0.25
UPK1A-201ENST00000222275 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
UPK1A-201ENST00000222275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.61■□□□□ 0.25
UPK1A-201ENST00000222275 ELP3Q9H9T3 547 aa16.61■□□□□ 0.25
UPK1A-201ENST00000222275 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
UPK1A-201ENST00000222275 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
UPK1A-201ENST00000222275 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
UPK1A-201ENST00000222275 IREB2P48200 963 aaKnown RBP16.6■□□□□ 0.25
UPK1A-201ENST00000222275 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 TCP10Q12799 353 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 TNFAIP1Q13829 316 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 VGLL4Q14135 290 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 FKBP1CQ5VVH2 108 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 B4GALNT3Q6L9W6 998 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 FAM83AQ86UY5 434 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 CHD1LQ86WJ1 897 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
UPK1A-201ENST00000222275 ZNF296Q8WUU4 475 aaPredicted RBP16.6■□□□□ 0.25
UPK1A-201ENST00000222275 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 BCL11AQ9H165 835 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 ECHDC1Q9NTX5 307 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 AKAP11Q9UKA4 1901 aa16.6■□□□□ 0.25
UPK1A-201ENST00000222275 ERC2O15083 957 aa16.59■□□□□ 0.25
UPK1A-201ENST00000222275 CAP1Q01518 475 aa16.59■□□□□ 0.25
UPK1A-201ENST00000222275 SPTY2D1Q68D10 685 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-201ENST00000222275 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
UPK1A-201ENST00000222275 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
UPK1A-201ENST00000222275 ANKRD13AQ8IZ07 590 aa16.59■□□□□ 0.25
UPK1A-201ENST00000222275 SPATA5Q8NB90 893 aa16.59■□□□□ 0.25
UPK1A-201ENST00000222275 ZKSCAN4Q969J2 545 aaPredicted RBP16.59■□□□□ 0.25
UPK1A-201ENST00000222275 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.25
UPK1A-201ENST00000222275 UNCXA6NJT0 531 aa16.58■□□□□ 0.24
UPK1A-201ENST00000222275 ATP5JP18859 108 aa16.58■□□□□ 0.24
UPK1A-201ENST00000222275 MCAMP43121 646 aa16.58■□□□□ 0.24
UPK1A-201ENST00000222275 FAM151AQ8WW52 585 aa16.58■□□□□ 0.24
UPK1A-201ENST00000222275 OPTNQ96CV9 577 aa16.58■□□□□ 0.24
UPK1A-201ENST00000222275 TLR7Q9NYK1 1049 aaKnown RBP16.58■□□□□ 0.24
UPK1A-201ENST00000222275 ABCF2Q9UG63 623 aa16.58■□□□□ 0.24
UPK1A-201ENST00000222275 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms