RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 PLA2G12BQ9BX93 195 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 POLR3EQ9NVU0 708 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 DBNLQ9UJU6 430 aaKnown RBP18.44■□□□□ 0.54
SF3A2-201ENST00000221494 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
SF3A2-201ENST00000221494 BRAPQ7Z569 592 aa18.43■□□□□ 0.54
SF3A2-201ENST00000221494 SYNE4Q8N205 404 aa18.43■□□□□ 0.54
SF3A2-201ENST00000221494 SIL1Q9H173 461 aa18.43■□□□□ 0.54
SF3A2-201ENST00000221494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.43■□□□□ 0.546e-7■□□□□ 10.9
SF3A2-201ENST00000221494 NLRP12P59046 1061 aa18.42■□□□□ 0.54
SF3A2-201ENST00000221494 TIGD1Q96MW7 591 aa18.42■□□□□ 0.54
SF3A2-201ENST00000221494 EP400Q96L91 3159 aa18.42■□□□□ 0.54
SF3A2-201ENST00000221494 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
SF3A2-201ENST00000221494 CDHR2Q9BYE9 1310 aa18.42■□□□□ 0.54
SF3A2-201ENST00000221494 COL5A3P25940 1745 aaPredicted RBP18.42■□□□□ 0.54
SF3A2-201ENST00000221494 SDF4Q9BRK5 362 aa18.42■□□□□ 0.54
SF3A2-201ENST00000221494 GPR108Q9NPR9 543 aa18.42■□□□□ 0.54
SF3A2-201ENST00000221494 TRMT1Q9NXH9 659 aaKnown RBP18.42■□□□□ 0.54
SF3A2-201ENST00000221494 CBFA2T2O43439 604 aa18.41■□□□□ 0.54
SF3A2-201ENST00000221494 RPS6KA4O75676 772 aa18.41■□□□□ 0.54
SF3A2-201ENST00000221494 ETF1P62495 437 aaKnown RBP18.41■□□□□ 0.54
SF3A2-201ENST00000221494 SLC20A2Q08357 652 aa18.41■□□□□ 0.54
SF3A2-201ENST00000221494 TSPYL1Q9H0U9 437 aa18.41■□□□□ 0.54
SF3A2-201ENST00000221494 ZNF446Q9NWS9 450 aa18.41■□□□□ 0.54
SF3A2-201ENST00000221494 TRMT112Q9UI30 125 aaKnown RBP18.41■□□□□ 0.54
SF3A2-201ENST00000221494 PCDHA7Q9UN72 937 aa18.41■□□□□ 0.54
SF3A2-201ENST00000221494 CSF1RP07333 972 aa18.41■□□□□ 0.54
SF3A2-201ENST00000221494 NOL10Q9BSC4 688 aaKnown RBP18.41■□□□□ 0.54
SF3A2-201ENST00000221494 DHX16O60231 1041 aaKnown RBP18.4■□□□□ 0.54
SF3A2-201ENST00000221494 ARMCX5Q6P1M9 558 aa18.4■□□□□ 0.54
SF3A2-201ENST00000221494 STOX1Q6ZVD7 989 aa18.4■□□□□ 0.54
SF3A2-201ENST00000221494 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
SF3A2-201ENST00000221494 LINC00301Q8NCQ3 95 aa18.4■□□□□ 0.54
SF3A2-201ENST00000221494 XPO4Q9C0E2 1151 aaKnown RBP18.4■□□□□ 0.54
SF3A2-201ENST00000221494 GOLGA6L9A6NEM1 432 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 IGSF3O75054 1194 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 TRIM37O94972 964 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 CYP2C19P33261 490 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 CEBPZQ03701 1054 aaKnown RBP18.39■□□□□ 0.53
SF3A2-201ENST00000221494 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 CLEC4GQ6UXB4 293 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.39■□□□□ 0.53
SF3A2-201ENST00000221494 ILDR1Q86SU0 546 aaPredicted RBP18.39■□□□□ 0.53
SF3A2-201ENST00000221494 LRRC4BQ9NT99 713 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 FHOD1Q9Y613 1164 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 SBF2Q86WG5 1849 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.531e-7■□□□□ 11.2
SF3A2-201ENST00000221494 RXRBP28702 533 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 PDIA3P30101 505 aaKnown RBP18.39■□□□□ 0.53
SF3A2-201ENST00000221494 TEX35Q5T0J7 233 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 FBXO41Q8TF61 875 aa18.39■□□□□ 0.53
SF3A2-201ENST00000221494 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
SF3A2-201ENST00000221494 IRS4O14654 1257 aaPredicted RBP18.38■□□□□ 0.53
SF3A2-201ENST00000221494 GNPATO15228 680 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 SLC3A2P08195 630 aaKnown RBP18.38■□□□□ 0.53
SF3A2-201ENST00000221494 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 TMC6Q7Z403 805 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 IFNKQ9P0W0 207 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 DNAI1Q9UI46 699 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 NEDD4P46934 1319 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 WDR19Q8NEZ3 1342 aa18.38■□□□□ 0.53
SF3A2-201ENST00000221494 EFCAB8A8MWE9 144 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 RGL2O15211 777 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 SMC2O95347 1197 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 CMA1P23946 247 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 CLCN6P51797 869 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 STK38Q15208 465 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 SYT10Q6XYQ8 523 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 NIP7Q9Y221 180 aaKnown RBP eCLIP18.37■□□□□ 0.53
SF3A2-201ENST00000221494 ZNF652Q9Y2D9 606 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 PNMA6AP0CW24 399 aaPredicted RBP18.37■□□□□ 0.53
SF3A2-201ENST00000221494 TFCP2Q12800 502 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 SF3A1Q15459 793 aaKnown RBP18.37■□□□□ 0.53
SF3A2-201ENST00000221494 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
SF3A2-201ENST00000221494 DPCR1Q3MIW9 517 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 TMCO3Q6UWJ1 677 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 ATG9AQ7Z3C6 839 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 TTLL11Q8NHH1 800 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
SF3A2-201ENST00000221494 UBXN4Q92575 508 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 TMX1Q9H3N1 280 aa18.37■□□□□ 0.53
SF3A2-201ENST00000221494 ORC3Q9UBD5 711 aaPredicted RBP18.37■□□□□ 0.53
SF3A2-201ENST00000221494 ZSCAN12O43309 604 aa18.36■□□□□ 0.53
SF3A2-201ENST00000221494 NDUFA8P51970 172 aa18.36■□□□□ 0.53
SF3A2-201ENST00000221494 NCAPHQ15003 741 aa18.36■□□□□ 0.53
SF3A2-201ENST00000221494 ERCC6LQ2NKX8 1250 aa18.36■□□□□ 0.53
SF3A2-201ENST00000221494 SECISBP2LQ93073 1101 aaKnown RBP18.36■□□□□ 0.53
SF3A2-201ENST00000221494 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
SF3A2-201ENST00000221494 UTP14AQ9BVJ6 771 aaKnown RBP18.36■□□□□ 0.53
SF3A2-201ENST00000221494 FTOQ9C0B1 505 aaKnown RBP eCLIP18.36■□□□□ 0.53
SF3A2-201ENST00000221494 NARFQ9UHQ1 456 aa18.36■□□□□ 0.53
SF3A2-201ENST00000221494 RTCBQ9Y3I0 505 aaKnown RBP18.36■□□□□ 0.53
SF3A2-201ENST00000221494 E7EWF7 191 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 SPTLC2O15270 562 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
SF3A2-201ENST00000221494 MPHOSPH8Q99549 860 aa18.35■□□□□ 0.53
SF3A2-201ENST00000221494 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms