RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RBSNQ9H1K0 784 aa34.82■■■■□ 3.16
PABPN1-201ENST00000216727 TMED8Q6PL24 325 aaPredicted RBP34.81■■■■□ 3.16
PABPN1-201ENST00000216727 IGDCC4Q8TDY8 1250 aa34.81■■■■□ 3.16
PABPN1-201ENST00000216727 CTDSPL2Q05D32 466 aa34.81■■■■□ 3.16
PABPN1-201ENST00000216727 SGMS1Q86VZ5 419 aa34.81■■■■□ 3.16
PABPN1-201ENST00000216727 TRIM37O94972 964 aa34.8■■■■□ 3.16
PABPN1-201ENST00000216727 MFSD6Q6ZSS7 791 aa34.8■■■■□ 3.16
PABPN1-201ENST00000216727 MYH13Q9UKX3 1938 aa34.8■■■■□ 3.16
PABPN1-201ENST00000216727 LIFRP42702 1097 aa34.79■■■■□ 3.16
PABPN1-201ENST00000216727 SPATA32Q96LK8 384 aa34.79■■■■□ 3.16
PABPN1-201ENST00000216727 RGS22Q8NE09 1264 aa34.79■■■■□ 3.16
PABPN1-201ENST00000216727 LEO1Q8WVC0 666 aaPredicted RBP34.79■■■■□ 3.16
PABPN1-201ENST00000216727 TFCP2L1Q9NZI6 479 aa34.79■■■■□ 3.16
PABPN1-201ENST00000216727 LEMD3Q9Y2U8 911 aa34.79■■■■□ 3.16
PABPN1-201ENST00000216727 CPLX1O14810 134 aa34.78■■■■□ 3.16
PABPN1-201ENST00000216727 MTA3Q9BTC8 594 aa34.78■■■■□ 3.16
PABPN1-201ENST00000216727 ZSWIM5Q9P217 1185 aa34.78■■■■□ 3.16
PABPN1-201ENST00000216727 CFAP45Q9UL16 551 aa34.78■■■■□ 3.16
PABPN1-201ENST00000216727 TACC3Q9Y6A5 838 aa34.78■■■■□ 3.16
PABPN1-201ENST00000216727 CRY2Q49AN0 593 aa34.77■■■■□ 3.16
PABPN1-201ENST00000216727 ZNF384Q8TF68 577 aa34.77■■■■□ 3.16
PABPN1-201ENST00000216727 RNF41Q9H4P4 317 aaPredicted RBP34.77■■■■□ 3.16
PABPN1-201ENST00000216727 LY9Q9HBG7 655 aa34.77■■■■□ 3.16
PABPN1-201ENST00000216727 ANAPC4Q9UJX5 808 aa34.77■■■■□ 3.16
PABPN1-201ENST00000216727 APOA5Q6Q788 366 aa34.77■■■■□ 3.16
PABPN1-201ENST00000216727 NSUN4Q96CB9 384 aaKnown RBP34.77■■■■□ 3.16
PABPN1-201ENST00000216727 TFIP11Q9UBB9 837 aaKnown RBP34.77■■■■□ 3.16
PABPN1-201ENST00000216727 KDM4AO75164 1064 aa34.76■■■■□ 3.16
PABPN1-201ENST00000216727 ATL3Q6DD88 541 aa34.76■■■■□ 3.16
PABPN1-201ENST00000216727 INCENPQ9NQS7 918 aa34.76■■■■□ 3.16
PABPN1-201ENST00000216727 IGSF3O75054 1194 aa34.76■■■■□ 3.15
PABPN1-201ENST00000216727 TSPY26PQ9H489 355 aa34.76■■■■□ 3.15
PABPN1-201ENST00000216727 ST5P78524 1137 aa34.75■■■■□ 3.15
PABPN1-201ENST00000216727 TMEM67Q5HYA8 995 aa34.75■■■■□ 3.15
PABPN1-201ENST00000216727 EP400Q96L91 3159 aa34.74■■■■□ 3.15
PABPN1-201ENST00000216727 SERPINB2P05120 415 aa34.74■■■■□ 3.15
PABPN1-201ENST00000216727 METAP2P50579 478 aaKnown RBP eCLIP34.74■■■■□ 3.15
PABPN1-201ENST00000216727 PPARAQ07869 468 aa34.74■■■■□ 3.15
PABPN1-201ENST00000216727 BRIP1Q9BX63 1249 aa34.74■■■■□ 3.15
PABPN1-201ENST00000216727 ORC3Q9UBD5 711 aaPredicted RBP34.74■■■■□ 3.15
PABPN1-201ENST00000216727 ADD1P35611 737 aaKnown RBP34.74■■■■□ 3.15
PABPN1-201ENST00000216727 GIMAP6Q6P9H5 292 aa34.74■■■■□ 3.15
PABPN1-201ENST00000216727 TXNRD3Q86VQ6 643 aa34.74■■■■□ 3.15
PABPN1-201ENST00000216727 SDR42E1Q8WUS8 393 aa34.74■■■■□ 3.15
PABPN1-201ENST00000216727 ANP32BQ92688 251 aaKnown RBP34.74■■■■□ 3.15
PABPN1-201ENST00000216727 XDHP47989 1333 aa34.73■■■■□ 3.15
PABPN1-201ENST00000216727 MYH15Q9Y2K3 1946 aa34.73■■■■□ 3.15
PABPN1-201ENST00000216727 RPGRQ92834 1020 aaKnown RBP34.73■■■■□ 3.15
PABPN1-201ENST00000216727 ANKIB1Q9P2G1 1089 aa34.73■■■■□ 3.15
PABPN1-201ENST00000216727 CDKL5O76039 1030 aa34.72■■■■□ 3.15
PABPN1-201ENST00000216727 MECOMQ03112 1051 aa34.72■■■■□ 3.15
PABPN1-201ENST00000216727 IFIT3O14879 490 aaKnown RBP34.72■■■■□ 3.15
PABPN1-201ENST00000216727 TXNRD1Q16881 649 aa34.72■■■■□ 3.15
PABPN1-201ENST00000216727 C15orf52Q6ZUT6 534 aaKnown RBP34.72■■■■□ 3.15
PABPN1-201ENST00000216727 ZBTB43O43298 467 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 PPFIA3O75145 1194 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 CCDC173Q0VFZ6 552 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 RAB11FIP4Q86YS3 637 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 C8orf76Q96K31 380 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 SENP2Q9HC62 589 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 MAST2Q6P0Q8 1798 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 CPLX2Q6PUV4 134 aaKnown RBP34.71■■■■□ 3.15
PABPN1-201ENST00000216727 PROM2Q8N271 834 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 FBXO18Q8NFZ0 1043 aa34.71■■■■□ 3.15
PABPN1-201ENST00000216727 FOSBP53539 338 aa34.7■■■■□ 3.15
PABPN1-201ENST00000216727 DYNLL1P63167 89 aaKnown RBP34.7■■■■□ 3.15
PABPN1-201ENST00000216727 SART3Q15020 963 aaKnown RBP34.7■■■■□ 3.15
PABPN1-201ENST00000216727 NFXL1Q6ZNB6 911 aa34.7■■■■□ 3.15
PABPN1-201ENST00000216727 PPP1R9BQ96SB3 815 aa34.7■■■■□ 3.15
PABPN1-201ENST00000216727 NID2Q14112 1375 aa34.7■■■■□ 3.15
PABPN1-201ENST00000216727 GOLGA6L4A6NEF3 574 aa34.69■■■■□ 3.14
PABPN1-201ENST00000216727 TPRNQ4KMQ1 711 aa34.69■■■■□ 3.14
PABPN1-201ENST00000216727 SPTY2D1Q68D10 685 aaPredicted RBP34.69■■■■□ 3.14
PABPN1-201ENST00000216727 ZNF396Q96N95 335 aaPredicted RBP34.69■■■■□ 3.14
PABPN1-201ENST00000216727 CHAF1AQ13111 956 aaPredicted RBP34.68■■■■□ 3.14
PABPN1-201ENST00000216727 SLC12A7Q9Y666 1083 aa34.68■■■■□ 3.14
PABPN1-201ENST00000216727 RBM6P78332 1123 aaKnown RBP34.67■■■■□ 3.14
PABPN1-201ENST00000216727 TMTC2Q8N394 836 aa34.67■■■■□ 3.14
PABPN1-201ENST00000216727 RBM17Q96I25 401 aaKnown RBP34.67■■■■□ 3.14
PABPN1-201ENST00000216727 RCOR1Q9UKL0 485 aa34.67■■■■□ 3.14
PABPN1-201ENST00000216727 CCDC69A6NI79 296 aa34.67■■■■□ 3.14
PABPN1-201ENST00000216727 PRDX5P30044 214 aa34.67■■■■□ 3.14
PABPN1-201ENST00000216727 GUCY1B3Q02153 619 aa34.67■■■■□ 3.14
PABPN1-201ENST00000216727 RRP12Q5JTH9 1297 aaKnown RBP34.67■■■■□ 3.14
PABPN1-201ENST00000216727 MICU3Q86XE3 530 aa34.67■■■■□ 3.14
PABPN1-201ENST00000216727 CCDC88AQ3V6T2 1871 aa34.66■■■■□ 3.14
PABPN1-201ENST00000216727 MINDY4BA8MYZ0 360 aa34.66■■■■□ 3.14
PABPN1-201ENST00000216727 PCP11498 1178 aaKnown RBP34.66■■■■□ 3.14
PABPN1-201ENST00000216727 ILDR1Q86SU0 546 aaPredicted RBP34.66■■■■□ 3.14
PABPN1-201ENST00000216727 TDRD7Q8NHU6 1098 aaKnown RBP34.66■■■■□ 3.14
PABPN1-201ENST00000216727 TOMM22Q9NS69 142 aa34.66■■■■□ 3.14
PABPN1-201ENST00000216727 POLRMTO00411 1230 aaKnown RBP34.65■■■■□ 3.14
PABPN1-201ENST00000216727 CDC27P30260 824 aa34.65■■■■□ 3.14
PABPN1-201ENST00000216727 HOXA10P31260 410 aaPredicted RBP34.65■■■■□ 3.14
PABPN1-201ENST00000216727 DDR1Q08345 913 aa34.65■■■■□ 3.14
PABPN1-201ENST00000216727 WDR66Q8TBY9 1149 aa34.65■■■■□ 3.14
PABPN1-201ENST00000216727 PGBD1Q96JS3 809 aa34.65■■■■□ 3.14
PABPN1-201ENST00000216727 GOLGA8AA7E2F4 631 aa34.65■■■■□ 3.14
PABPN1-201ENST00000216727 RCAN1P53805 252 aa34.65■■■■□ 3.14
PABPN1-201ENST00000216727 NTRK3Q16288 839 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms