RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 MBD3O95983 291 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 APBA3O96018 575 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 HIBADHP31937 336 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 ST3GAL1Q11201 340 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 SLC10A5Q5PT55 438 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 FAM173BQ6P4H8 233 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 LRSAM1Q6UWE0 723 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 CCDC94Q9BW85 323 aaPredicted RBP10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 GOLGA8BA8MQT2 603 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 B4E1Z4 1266 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 PRKAB2O43741 272 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 GUCY1B3Q02153 619 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 CTDSPL2Q05D32 466 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 SCRN1Q12765 414 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 NAA16Q6N069 864 aaPredicted RBP10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 CDC37L1Q7L3B6 337 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 STRBPQ96SI9 672 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 YY1AP1Q9H869 796 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 DENND2AQ9ULE3 1009 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 MTMR6Q9Y217 621 aa10.4□□□□□ -0.74
MTHFD1-201ENST00000216605 SERPINB2P05120 415 aa10.4□□□□□ -0.75
MTHFD1-201ENST00000216605 IFNL3Q8IZI9 196 aa10.4□□□□□ -0.75
MTHFD1-201ENST00000216605 SYAP1Q96A49 352 aaPredicted RBP10.4□□□□□ -0.75
MTHFD1-201ENST00000216605 CGNQ9P2M7 1197 aaKnown RBP10.4□□□□□ -0.75
MTHFD1-201ENST00000216605 TFIP11Q9UBB9 837 aaKnown RBP10.4□□□□□ -0.75
MTHFD1-201ENST00000216605 RTL9Q8NET4 1388 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 MAGEB6P1A0A0J9YX57 407 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 ONECUT3O60422 494 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 KLRK1P26718 216 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 CEBPZQ03701 1054 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 SASS6Q6UVJ0 657 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 LCORLQ8N3X6 602 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 GPT2Q8TD30 523 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 FAM84BQ96KN1 310 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 GEMIN8Q9NWZ8 242 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 CARMIL3Q8ND23 1372 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 ZNF804BA4D1E1 1349 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 PTPDC1A2A3K4 754 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 TXNRD1Q16881 649 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 CCDC144CPQ8IYA2 1237 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 INCENPQ9NQS7 918 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 BTAF1O14981 1849 aa10.39□□□□□ -0.75
MTHFD1-201ENST00000216605 RXRAP19793 462 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 KRT85P78386 507 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 MFSD6Q6ZSS7 791 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 SDR42E1Q8WUS8 393 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 ERICH2A1L162 156 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 SYCE3A1L190 88 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 DHX16O60231 1041 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 PDIA3P30101 505 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 EXOSC10Q01780 885 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 SYNE3Q6ZMZ3 975 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 DZIP1Q86YF9 867 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 ATRNO75882 1429 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 IFIT3O14879 490 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 PFKFB2O60825 505 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 GNAT2P19087 354 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 PRR5LQ6MZQ0 368 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 MICU3Q86XE3 530 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 TBC1D10CQ8IV04 446 aa10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 GPR101Q96P66 508 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-201ENST00000216605 TCRBV5S4A2TA0A5A2 114 aa10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 FOXP2O15409 715 aa10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 GYS1P13807 737 aa10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 RBM6P78332 1123 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 HMGN5P82970 282 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 TMEM67Q5HYA8 995 aa10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 ZNF772Q68DY9 489 aaPredicted RBP10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 CPLX2Q6PUV4 134 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 ZKSCAN3Q9BRR0 538 aa10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 GRAPQ13588 217 aa10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 SART3Q15020 963 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 GRAPLQ8TC17 118 aaPredicted RBP10.37□□□□□ -0.75
MTHFD1-201ENST00000216605 CCDC69A6NI79 296 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 DYNLL1P63167 89 aaKnown RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 GNL2Q13823 731 aaKnown RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 ZNF274Q96GC6 653 aaPredicted RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 TAF1P21675 1872 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 UFL1O94874 794 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 CC2D2BQ6DHV5 1058 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 RBM17Q96I25 401 aaKnown RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 TMX4Q9H1E5 349 aaPredicted RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 AATFQ9NY61 560 aaKnown RBP eCLIP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 TMEM63CQ9P1W3 806 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 SPEF2Q9C093 1822 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 GSG1L2A8MUP6 293 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 G3V3G9 751 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 RGL2O15211 777 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 METAP2P50579 478 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms