RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CA8P35219 290 aa21.28■■□□□ 1
MBD3-201ENST00000156825 RAPGEF1Q13905 1077 aa21.28■■□□□ 1
MBD3-201ENST00000156825 SYT10Q6XYQ8 523 aa21.28■■□□□ 1
MBD3-201ENST00000156825 STAMQ92783 540 aa21.28■■□□□ 1
MBD3-201ENST00000156825 COMMD10Q9Y6G5 202 aa21.28■■□□□ 1
MBD3-201ENST00000156825 FSD2A1L4K1 749 aa21.28■■□□□ 1
MBD3-201ENST00000156825 POTEB2H3BUK9 544 aa21.28■■□□□ 1
MBD3-201ENST00000156825 TXKP42681 527 aa21.28■■□□□ 1
MBD3-201ENST00000156825 FAM160A1Q05DH4 1040 aa21.28■■□□□ 1
MBD3-201ENST00000156825 VPS16Q9H269 839 aa21.28■■□□□ 1
MBD3-201ENST00000156825 KDM2BQ8NHM5 1336 aa21.28■■□□□ 1
MBD3-201ENST00000156825 EEF2P13639 858 aaKnown RBP21.28■■□□□ 1
MBD3-201ENST00000156825 ANO1Q5XXA6 986 aa21.28■■□□□ 1
MBD3-201ENST00000156825 LPIN2Q92539 896 aa21.28■■□□□ 1
MBD3-201ENST00000156825 SEC62Q99442 399 aaKnown RBP21.28■■□□□ 1
MBD3-201ENST00000156825 NEURL1BA8MQ27 555 aa21.27■■□□□ 1
MBD3-201ENST00000156825 TACC1O75410 805 aa21.27■■□□□ 1
MBD3-201ENST00000156825 PPM1FP49593 454 aaPredicted RBP21.27■■□□□ 1
MBD3-201ENST00000156825 IFI16Q16666 785 aaKnown RBP21.27■■□□□ 1
MBD3-201ENST00000156825 NEK11Q8NG66 645 aa21.27■■□□□ 1
MBD3-201ENST00000156825 POLR2DO15514 142 aaKnown RBP21.27■■□□□ 1
MBD3-201ENST00000156825 GADD45BO75293 160 aaPredicted RBP21.27■■□□□ 1
MBD3-201ENST00000156825 BMS1Q14692 1282 aaKnown RBP21.27■■□□□ 1
MBD3-201ENST00000156825 ZNF569Q5MCW4 686 aa21.27■■□□□ 1
MBD3-201ENST00000156825 PPP1R9BQ96SB3 815 aa21.27■■□□□ 1
MBD3-201ENST00000156825 TRAF5O00463 557 aa21.27■■□□□ 1
MBD3-201ENST00000156825 SPATA5Q8NB90 893 aa21.27■■□□□ 1
MBD3-201ENST00000156825 RBM28Q9NW13 759 aaKnown RBP21.27■■□□□ 1
MBD3-201ENST00000156825 FAM47AQ5JRC9 791 aa21.27■□□□□ 0.99
MBD3-201ENST00000156825 CDC37L1Q7L3B6 337 aa21.27■□□□□ 0.99
MBD3-201ENST00000156825 USP37Q86T82 979 aa21.27■□□□□ 0.99
MBD3-201ENST00000156825 CMTR1Q8N1G2 835 aaKnown RBP21.27■□□□□ 0.99
MBD3-201ENST00000156825 TMEM87BQ96K49 555 aa21.27■□□□□ 0.99
MBD3-201ENST00000156825 GIGYF1O75420 1035 aaPredicted RBP21.26■□□□□ 0.99
MBD3-201ENST00000156825 DEXIO95424 95 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 KCNH3Q9ULD8 1083 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 IMPG2Q9BZV3 1241 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 LUC7L2Q9Y383 392 aaKnown RBP21.26■□□□□ 0.99
MBD3-201ENST00000156825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.26■□□□□ 0.99
MBD3-201ENST00000156825 PLCB3Q01970 1234 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 MYL5Q02045 173 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 MAEAQ7L5Y9 396 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 ARFGAP3Q9NP61 516 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 HOMER2Q9NSB8 354 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 CCNT1O60563 726 aaKnown RBP21.26■□□□□ 0.99
MBD3-201ENST00000156825 RAD51AP2Q09MP3 1159 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 CTNND2Q9UQB3 1225 aa21.26■□□□□ 0.99
MBD3-201ENST00000156825 RILPL1Q5EBL4 403 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 CTAGE9A4FU28 777 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 DYNC1I1O14576 645 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 CLCN1P35523 988 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 ZHX1Q9UKY1 873 aaPredicted RBP21.25■□□□□ 0.99
MBD3-201ENST00000156825 ELP1O95163 1332 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 RHOXF2BP0C7M4 288 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 CPXCR1Q8N123 301 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 EAF2Q96CJ1 260 aaPredicted RBP21.25■□□□□ 0.99
MBD3-201ENST00000156825 RHOXF2Q9BQY4 288 aa21.25■□□□□ 0.99
MBD3-201ENST00000156825 FAM170AA1A519 330 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 KRT86O43790 486 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 MRPL12P52815 198 aaKnown RBP21.24■□□□□ 0.99
MBD3-201ENST00000156825 DPP8Q6V1X1 898 aaPredicted RBP21.24■□□□□ 0.99
MBD3-201ENST00000156825 TGFBRAP1Q8WUH2 860 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 NPC1L1Q9UHC9 1359 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 BICDL2A1A5D9 508 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 ZNF354CQ86Y25 554 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 PDE4DQ08499 809 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 SV2BQ7L1I2 683 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 ZNF408Q9H9D4 720 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 NF2P35240 595 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
MBD3-201ENST00000156825 PAIP2Q9BPZ3 127 aaKnown RBP21.24■□□□□ 0.99
MBD3-201ENST00000156825 CKAP4Q07065 602 aaKnown RBP21.23■□□□□ 0.99
MBD3-201ENST00000156825 ATP10AO60312 1499 aa21.23■□□□□ 0.99
MBD3-201ENST00000156825 DNMT1P26358 1616 aaKnown RBP21.23■□□□□ 0.99
MBD3-201ENST00000156825 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
MBD3-201ENST00000156825 GSPT1P15170 499 aaKnown RBP21.23■□□□□ 0.99
MBD3-201ENST00000156825 C17orf53Q8N3J3 647 aaPredicted RBP21.23■□□□□ 0.99
MBD3-201ENST00000156825 DDX39AO00148 427 aaKnown RBP21.23■□□□□ 0.99
MBD3-201ENST00000156825 HSF2BPO75031 334 aa21.23■□□□□ 0.99
MBD3-201ENST00000156825 USH1GQ495M9 461 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 PKNOX2Q96KN3 472 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 SLU7O95391 586 aaKnown RBP21.22■□□□□ 0.99
MBD3-201ENST00000156825 KRT40Q6A162 431 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 CEP112Q8N8E3 955 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 A0A0D9SFI3 127 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 KRT83P78385 493 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 PTH1RQ03431 593 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 TCIRG1Q13488 830 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 MSL1Q68DK7 614 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 GINS2Q9Y248 185 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 SMIM23A6NLE4 172 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 LEO1Q8WVC0 666 aaPredicted RBP21.22■□□□□ 0.99
MBD3-201ENST00000156825 VPS54Q9P1Q0 977 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 IKBKGQ9Y6K9 419 aa21.22■□□□□ 0.99
MBD3-201ENST00000156825 GYG1P46976 350 aa21.21■□□□□ 0.99
MBD3-201ENST00000156825 CCDC50Q8IVM0 306 aa21.21■□□□□ 0.99
MBD3-201ENST00000156825 LARGE2Q8N3Y3 721 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms