RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 DCAF15Q66K64 600 aa13□□□□□ -0.33
PKP2-201ENST00000070846 PHACTR2O75167 634 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 KRT2P35908 639 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 DNA2P51530 1060 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 HSP90AA4PQ58FG1 418 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
PKP2-201ENST00000070846 DHX58Q96C10 678 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 SGSM2O43147 1006 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 C21orf2O43822 256 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 DTNBO60941 627 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.99□□□□□ -0.33
PKP2-201ENST00000070846 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
PKP2-201ENST00000070846 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
PKP2-201ENST00000070846 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 SPTLC2O15270 562 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 ZBED4O75132 1171 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 DTHD1Q6ZMT9 781 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 TAF4BQ92750 862 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
PKP2-201ENST00000070846 SLC27A2O14975 620 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 RRAGBQ5VZM2 374 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
PKP2-201ENST00000070846 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 RBM28Q9NW13 759 aaKnown RBP12.98□□□□□ -0.33
PKP2-201ENST00000070846 KIF24Q5T7B8 1368 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 CHMP2AO43633 222 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 NEFHP12036 1026 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 BTDP43251 543 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 UBE2HP62256 183 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 NOP56O00567 594 aaKnown RBP12.98□□□□□ -0.33
PKP2-201ENST00000070846 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
PKP2-201ENST00000070846 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.98□□□□□ -0.33
PKP2-201ENST00000070846 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
PKP2-201ENST00000070846 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 ADORA1P30542 326 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
PKP2-201ENST00000070846 SEC62Q99442 399 aaKnown RBP12.97□□□□□ -0.33
PKP2-201ENST00000070846 USP26Q9BXU7 913 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 N4BP3O15049 544 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 ACBD3Q9H3P7 528 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 SPAG5Q96R06 1193 aa12.97□□□□□ -0.33
PKP2-201ENST00000070846 TNNT1P13805 278 aa12.96□□□□□ -0.33
PKP2-201ENST00000070846 ZNF174Q15697 407 aa12.96□□□□□ -0.33
PKP2-201ENST00000070846 HS2ST1Q7LGA3 356 aa12.96□□□□□ -0.33
PKP2-201ENST00000070846 IL27Q8NEV9 243 aa12.96□□□□□ -0.33
PKP2-201ENST00000070846 FAM13AO94988 1023 aa12.96□□□□□ -0.33
PKP2-201ENST00000070846 HLFQ16534 295 aa12.96□□□□□ -0.33
PKP2-201ENST00000070846 GIMAP6Q6P9H5 292 aa12.96□□□□□ -0.33
PKP2-201ENST00000070846 TMC4Q7Z404 712 aa12.96□□□□□ -0.34
PKP2-201ENST00000070846 PIM2Q9P1W9 311 aa12.96□□□□□ -0.34
PKP2-201ENST00000070846 ABCC4O15439 1325 aa12.96□□□□□ -0.34
PKP2-201ENST00000070846 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.34
PKP2-201ENST00000070846 ERLIN2O94905 339 aa12.96□□□□□ -0.34
PKP2-201ENST00000070846 CERKLQ49MI3 558 aaPredicted RBP12.96□□□□□ -0.34
PKP2-201ENST00000070846 USP37Q86T82 979 aa12.96□□□□□ -0.34
PKP2-201ENST00000070846 DACT1Q9NYF0 836 aa12.96□□□□□ -0.34
PKP2-201ENST00000070846 USP25Q9UHP3 1055 aa12.96□□□□□ -0.34
PKP2-201ENST00000070846 VWA3AA6NCI4 1184 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 PSMA7O14818 248 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 KRT13P13646 458 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 OTUD7BQ6GQQ9 843 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 PHKBQ93100 1093 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 RPS6KB1P23443 525 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 PPARAQ07869 468 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 CLEC4GQ6UXB4 293 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 CHURC1Q8WUH1 139 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 RMND1Q9NWS8 449 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 ARPP21Q9UBL0 812 aaPredicted RBP12.95□□□□□ -0.34
PKP2-201ENST00000070846 GCC2Q8IWJ2 1684 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 DEXIO95424 95 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 SEC24BO95487 1268 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 F13A1P00488 732 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
PKP2-201ENST00000070846 NPR1P16066 1061 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 GADL1Q6ZQY3 521 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
PKP2-201ENST00000070846 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
PKP2-201ENST00000070846 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
PKP2-201ENST00000070846 UBE2Q2Q8WVN8 375 aa12.94□□□□□ -0.34
PKP2-201ENST00000070846 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
PKP2-201ENST00000070846 NARFQ9UHQ1 456 aa12.94□□□□□ -0.34
PKP2-201ENST00000070846 TNNT3P45378 269 aaPredicted RBP12.94□□□□□ -0.34
PKP2-201ENST00000070846 STX1AQ16623 288 aa12.94□□□□□ -0.34
PKP2-201ENST00000070846 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
PKP2-201ENST00000070846 IMPG2Q9BZV3 1241 aa12.94□□□□□ -0.34
PKP2-201ENST00000070846 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
PKP2-201ENST00000070846 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
PKP2-201ENST00000070846 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
PKP2-201ENST00000070846 ALAS1P13196 640 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms