RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CACTINQ8WUQ7 758 aaKnown RBP15.28■□□□□ 0.04
CTNS-201ENST00000046640 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
CTNS-201ENST00000046640 ANGEL1Q9UNK9 670 aaKnown RBP15.28■□□□□ 0.04
CTNS-201ENST00000046640 MARCKSP29966 332 aaPredicted RBP15.28■□□□□ 0.04
CTNS-201ENST00000046640 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTNS-201ENST00000046640 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
CTNS-201ENST00000046640 SNW1Q13573 536 aaKnown RBP15.28■□□□□ 0.04
CTNS-201ENST00000046640 FAM182BQ5T319 152 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 C3orf67Q6ZVT6 689 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 FILIP1Q7Z7B0 1213 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 TACC3Q9Y6A5 838 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 LRP6O75581 1613 aa15.28■□□□□ 0.04
CTNS-201ENST00000046640 GOLGA6L19H0YKK7 550 aa15.27■□□□□ 0.04
CTNS-201ENST00000046640 DHX16O60231 1041 aaKnown RBP15.27■□□□□ 0.04
CTNS-201ENST00000046640 KINO60870 393 aaKnown RBP15.27■□□□□ 0.04
CTNS-201ENST00000046640 MAP3K12Q12852 859 aa15.27■□□□□ 0.04
CTNS-201ENST00000046640 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
CTNS-201ENST00000046640 IFNL3Q8IZI9 196 aa15.27■□□□□ 0.04
CTNS-201ENST00000046640 LCORLQ8N3X6 602 aa15.27■□□□□ 0.04
CTNS-201ENST00000046640 FBXO18Q8NFZ0 1043 aa15.27■□□□□ 0.04
CTNS-201ENST00000046640 TPM3P06753 285 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 GYG1P46976 350 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 EVCP57679 992 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 CHRNDQ07001 517 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 TMEM67Q5HYA8 995 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 SDF4Q9BRK5 362 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 TRMT1Q9NXH9 659 aaKnown RBP15.27■□□□□ 0.03
CTNS-201ENST00000046640 ZSWIM5Q9P217 1185 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.27■□□□□ 0.03
CTNS-201ENST00000046640 V9GYY5 206 aaPredicted RBP15.27■□□□□ 0.03
CTNS-201ENST00000046640 NUP98P52948 1817 aa15.27■□□□□ 0.03
CTNS-201ENST00000046640 TDO2P48775 406 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 CCDC152Q4G0S7 254 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 AKAP11Q9UKA4 1901 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 NDUFA8P51970 172 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 ISM2Q6H9L7 571 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 SLC4A4Q9Y6R1 1079 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 BIN1O00499 593 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 IFIT3O14879 490 aaKnown RBP15.26■□□□□ 0.03
CTNS-201ENST00000046640 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
CTNS-201ENST00000046640 GNL2Q13823 731 aaKnown RBP15.26■□□□□ 0.03
CTNS-201ENST00000046640 ERFEQ4G0M1 354 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 APOA5Q6Q788 366 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 SYNE3Q6ZMZ3 975 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 SDR42E1Q8WUS8 393 aa15.26■□□□□ 0.03
CTNS-201ENST00000046640 SH2B2O14492 632 aaPredicted RBP15.25■□□□□ 0.03
CTNS-201ENST00000046640 NPHP1O15259 732 aa15.25■□□□□ 0.03
CTNS-201ENST00000046640 NTSR2O95665 410 aa15.25■□□□□ 0.03
CTNS-201ENST00000046640 ZNF512BQ96KM6 892 aaPredicted RBP15.25■□□□□ 0.03
CTNS-201ENST00000046640 USP27XA6NNY8 438 aa15.25■□□□□ 0.03
CTNS-201ENST00000046640 BECN2A8MW95 431 aa15.25■□□□□ 0.03
CTNS-201ENST00000046640 MINDY4BA8MYZ0 360 aa15.25■□□□□ 0.03
CTNS-201ENST00000046640 PATL2C9JE40 543 aaKnown RBP15.25■□□□□ 0.03
CTNS-201ENST00000046640 MYSM1Q5VVJ2 828 aa15.25■□□□□ 0.03
CTNS-201ENST00000046640 RBM43Q6ZSC3 357 aaKnown RBP15.25■□□□□ 0.03
CTNS-201ENST00000046640 LINC00301Q8NCQ3 95 aa15.25■□□□□ 0.03
CTNS-201ENST00000046640 GSG1L2A8MUP6 293 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 FAM160A1Q05DH4 1040 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 ADGRA1Q86SQ6 560 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 JAG2Q9Y219 1238 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 ROBO1Q9Y6N7 1651 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 ZBTB43O43298 467 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 ENGASEQ8NFI3 743 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 IGDCC4Q8TDY8 1250 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
CTNS-201ENST00000046640 GOLGA8AA7E2F4 631 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 SPTLC2O15270 562 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 ZSCAN20P17040 1043 aaPredicted RBP15.23■□□□□ 0.03
CTNS-201ENST00000046640 FBXL16Q8N461 479 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 MRPS27Q92552 414 aaKnown RBP15.23■□□□□ 0.03
CTNS-201ENST00000046640 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 RTEL1Q9NZ71 1219 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 ABCC12Q96J65 1359 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 SPEF2Q9C093 1822 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 CYP7A1P22680 504 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 KIF23Q02241 960 aaPredicted RBP15.23■□□□□ 0.03
CTNS-201ENST00000046640 TDRD7Q8NHU6 1098 aaKnown RBP15.23■□□□□ 0.03
CTNS-201ENST00000046640 LY9Q9HBG7 655 aa15.23■□□□□ 0.03
CTNS-201ENST00000046640 RANBP6O60518 1105 aaKnown RBP15.22■□□□□ 0.03
CTNS-201ENST00000046640 KRT40Q6A162 431 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 MFSD6Q6ZSS7 791 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 NUP133Q8WUM0 1156 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 SLC12A7Q9Y666 1083 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 DOT1LQ8TEK3 1739 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 ZMYM6O95789 1325 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 COL14A1Q05707 1796 aaKnown RBP15.22■□□□□ 0.03
CTNS-201ENST00000046640 CYP2D7A0A087X1C5 515 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 GUCY1A2P33402 732 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 NCBP1Q09161 790 aaKnown RBP15.22■□□□□ 0.03
CTNS-201ENST00000046640 VPS37DQ86XT2 251 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 CCDC69A6NI79 296 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 IARSP41252 1262 aaKnown RBP15.22■□□□□ 0.03
CTNS-201ENST00000046640 SLC4A8Q2Y0W8 1093 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
CTNS-201ENST00000046640 MYH3P11055 1940 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms