RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 RTBDNQ9BSG5 229 aaPredicted RBP5.97□□□□□ -1.45
LINC00339-212ENST00000642072 PBDC1Q9BVG4 233 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 MAGT1Q9H0U3 335 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 DOK5Q9P104 306 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 COMMD3Q9UBI1 195 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 IGKV1OR2-108A0A075B7D4 117 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 CEBPZOSA8MTT3 80 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 M0R2Z0 102 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 HPGDSO60760 199 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 NUDT3O95989 172 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 DEFB130BP0DP73 79 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 DEFB130AP0DP74 79 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 AZU1P20160 251 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 CCL18P55774 89 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 KLF9Q13886 244 aaPredicted RBP5.96□□□□□ -1.46
LINC00339-212ENST00000642072 GAMTQ14353 236 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 FCN2Q15485 313 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 SSX7Q7RTT5 188 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 OR11H7Q8NGC8 314 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 RNASE11Q8TAA1 199 aaKnown RBP5.96□□□□□ -1.46
LINC00339-212ENST00000642072 ZFAND1Q8TCF1 268 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 MARCH1Q8TCQ1 289 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 Q9H3A6 140 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 NAA60Q9H7X0 242 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 RPRMQ9NS64 109 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 HSPB7Q9UBY9 170 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 MTFP1Q9UDX5 166 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 TMEM56-RWDD3S4R434 201 aa5.96□□□□□ -1.46
LINC00339-212ENST00000642072 TRAV8-2A0A0B4J237 113 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 TEX13DA0A0J9YY54 714 aaPredicted RBP5.95□□□□□ -1.46
LINC00339-212ENST00000642072 CCDC160A6NGH7 325 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 CBY3A6NI87 242 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 EPM2AB3EWF7 344 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 F5H768 121 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 INSP01308 110 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 ATP5G1P05496 136 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 ATP5G3P48201 142 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 CNN1P51911 297 aaKnown RBP5.95□□□□□ -1.46
LINC00339-212ENST00000642072 NCS1P62166 190 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 SPINK13Q1W4C9 94 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 RNASE12Q5GAN4 147 aaKnown RBP5.95□□□□□ -1.46
LINC00339-212ENST00000642072 SAMD13Q5VXD3 122 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 TMEM268Q5VZI3 342 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 NOXA1Q86UR1 476 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 BAP18Q8IXM2 172 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 OR8I2Q8N0Y5 310 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 OR4C16Q8NGL9 310 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 PPP1R14BQ96C90 147 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 BCL7BQ9BQE9 202 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 UPK3BQ9BT76 320 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 TMEM208Q9BTX3 173 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 SLC25A32Q9H2D1 315 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 Q9H8V8 135 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 PFDN2Q9UHV9 154 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 U3KQ87 197 aa5.95□□□□□ -1.46
LINC00339-212ENST00000642072 A0A1W2PPQ1 181 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 CRYM-AS1A6NIL9 109 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 ZFP92A6NM28 416 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 GPX4P36969 197 aaPredicted RBP5.94□□□□□ -1.46
LINC00339-212ENST00000642072 MEOX2P50222 304 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 TMBIM6P55061 237 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 XGP55808 180 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 LYZP61626 148 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 SURF2Q15527 256 aaPredicted RBP5.94□□□□□ -1.46
LINC00339-212ENST00000642072 SCGB2B2Q4G0G5 96 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 GPR107Q5VW38 600 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 Q6ZRN7 208 aaPredicted RBP5.94□□□□□ -1.46
LINC00339-212ENST00000642072 LINC00299Q6ZSB3 139 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 LGI3Q8N145 548 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 TMEM229BQ8NBD8 167 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 DTD1Q8TEA8 209 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 ZNF503Q96F45 646 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 C16orf92Q96LL3 132 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 CACFD1Q9UGQ2 172 aa5.94□□□□□ -1.46
LINC00339-212ENST00000642072 SNRPGP15A8MWD9 76 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 RAB3DO95716 219 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 SULT1A3P0DMM9 295 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 SULT1A4P0DMN0 295 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 INAFM2P0DMQ5 153 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 ATP5IP56385 69 aaPredicted RBP5.93□□□□□ -1.46
LINC00339-212ENST00000642072 TAS2R19P59542 299 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 B2MP61769 119 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 OR2F1Q13607 317 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 TTC32Q5I0X7 151 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 FAAP20Q6NZ36 180 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 STEAP1BQ6NZ63 245 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 CLVS1Q8IUQ0 354 aaPredicted RBP5.93□□□□□ -1.46
LINC00339-212ENST00000642072 LYPD1Q8N2G4 141 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 LINC00612Q8N6U2 182 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 THAP8Q8NA92 274 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 IL22RA2Q969J5 263 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 TRGV9Q99603 122 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 RSG1Q9BU20 258 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 RBKSQ9H477 322 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 PRR13Q9NZ81 148 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 SLC45A2Q9UMX9 530 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 GPR132Q9UNW8 380 aa5.93□□□□□ -1.46
LINC00339-212ENST00000642072 TRAV12-2A0A075B6T6 113 aa5.92□□□□□ -1.46
LINC00339-212ENST00000642072 ZNF98A6NK75 572 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms