RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 PPP5D1E7EU14 171 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 FABP1P07148 127 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 SNRPCP09234 159 aaKnown RBP13.61□□□□□ -0.23
PHGDH-232ENST00000641947 PF4V1P10720 104 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 TMEM86BQ8N661 226 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 OR4F5Q8NH21 305 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 FXYD5Q96DB9 178 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 PRSS22Q9GZN4 317 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 NPFFR1Q9GZQ6 430 aa13.61□□□□□ -0.23
PHGDH-232ENST00000641947 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
PHGDH-232ENST00000641947 NSD1Q96L73 2696 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-232ENST00000641947 IGHV3OR16-8A0A075B7F1 116 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 TRBV7-1A0A0A6YYK4 115 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 TGOLN2O43493 480 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 TRBV12-3P01733 135 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 NPPCP23582 126 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 H3BRN7 92 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 NUPL2O15504 423 aaKnown RBP13.6□□□□□ -0.23
PHGDH-232ENST00000641947 IGHG4P01861 327 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 GP9P14770 177 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 PSMB8P28062 276 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 UBE2L3P68036 154 aaKnown RBP13.6□□□□□ -0.23
PHGDH-232ENST00000641947 SOHLH1Q5JUK2 328 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 CST9LP1Q5W188 147 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 Q8WTZ3 238 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 PAXXQ9BUH6 204 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 ZFAND3Q9H8U3 227 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 HIVEP2P31629 2446 aa13.6□□□□□ -0.23
PHGDH-232ENST00000641947 IGHV3-11P01762 117 aa13.59□□□□□ -0.23
PHGDH-232ENST00000641947 HNF1AP20823 631 aa13.59□□□□□ -0.23
PHGDH-232ENST00000641947 RAB9AP51151 201 aa13.59□□□□□ -0.23
PHGDH-232ENST00000641947 Q8N2B8 174 aa13.59□□□□□ -0.23
PHGDH-232ENST00000641947 OR51M1Q9H341 326 aa13.59□□□□□ -0.23
PHGDH-232ENST00000641947 TMEM167BQ9NRX6 74 aa13.59□□□□□ -0.23
PHGDH-232ENST00000641947 TMEM160Q9NX00 188 aa13.59□□□□□ -0.23
PHGDH-232ENST00000641947 TAGLN2P37802 199 aaKnown RBP13.58□□□□□ -0.23
PHGDH-232ENST00000641947 TOMM20LQ6UXN7 152 aa13.58□□□□□ -0.23
PHGDH-232ENST00000641947 SVBPQ8N300 66 aa13.58□□□□□ -0.23
PHGDH-232ENST00000641947 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.23
PHGDH-232ENST00000641947 GNB4Q9HAV0 340 aa13.58□□□□□ -0.23
PHGDH-232ENST00000641947 BAHCC1Q9P281 2608 aa13.58□□□□□ -0.24
PHGDH-232ENST00000641947 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
PHGDH-232ENST00000641947 ZNF600Q6ZNG1 722 aa13.58□□□□□ -0.24
PHGDH-232ENST00000641947 SERTAD4Q9NUC0 356 aa13.58□□□□□ -0.24
PHGDH-232ENST00000641947 FAM181BA6NEQ2 426 aa13.57□□□□□ -0.24
PHGDH-232ENST00000641947 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
PHGDH-232ENST00000641947 USMG5Q96IX5 58 aa13.57□□□□□ -0.24
PHGDH-232ENST00000641947 SETXQ7Z333 2677 aaKnown RBP13.56□□□□□ -0.24
PHGDH-232ENST00000641947 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.56□□□□□ -0.24
PHGDH-232ENST00000641947 CLPSL1A2RUU4 121 aa13.56□□□□□ -0.24
PHGDH-232ENST00000641947 TMEM250H0YL14 139 aa13.56□□□□□ -0.24
PHGDH-232ENST00000641947 Q71RC1 249 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-232ENST00000641947 ATP6V0BQ99437 205 aa13.56□□□□□ -0.24
PHGDH-232ENST00000641947 C20orf24Q9BUV8 137 aa13.56□□□□□ -0.24
PHGDH-232ENST00000641947 NKX6-2Q9C056 277 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-232ENST00000641947 GAR1Q9NY12 217 aaKnown RBP13.56□□□□□ -0.24
PHGDH-232ENST00000641947 SCO2A0A1W2PP80 73 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 H3BTX0 84 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 MRPS12O15235 138 aaKnown RBP13.55□□□□□ -0.24
PHGDH-232ENST00000641947 SCGB2A1O75556 95 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 CLRN3Q8NCR9 226 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 RPUSD4Q96CM3 377 aaKnown RBP13.55□□□□□ -0.24
PHGDH-232ENST00000641947 DERL1Q9BUN8 251 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 ARL2-SNX15V9GYD0 113 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 ZNF98A6NK75 572 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 H3BQ15 152 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 NDUFS6O75380 124 aaKnown RBP13.55□□□□□ -0.24
PHGDH-232ENST00000641947 ARL3P36405 182 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 Q6ZSV7 163 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 OR4X2Q8NGF9 303 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 PARLQ9H300 379 aa13.55□□□□□ -0.24
PHGDH-232ENST00000641947 RPLP1P05386 114 aaKnown RBP13.54□□□□□ -0.24
PHGDH-232ENST00000641947 SRD5A1P18405 259 aa13.54□□□□□ -0.24
PHGDH-232ENST00000641947 ZNF674Q2M3X9 581 aa13.54□□□□□ -0.24
PHGDH-232ENST00000641947 AWAT1Q58HT5 328 aa13.54□□□□□ -0.24
PHGDH-232ENST00000641947 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
PHGDH-232ENST00000641947 TMEM14CQ9P0S9 112 aa13.54□□□□□ -0.24
PHGDH-232ENST00000641947 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 TMEM89A2RUT3 159 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 PDE6DO43924 150 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 SNAPINO95295 136 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 MYOZ3Q8TDC0 251 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 TXNDC17Q9BRA2 123 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 ZNF586Q9NXT0 402 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 RABAC1Q9UI14 185 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 A0A0G2JLM5 398 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 BMPR1BO00238 502 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 NDUFB4O95168 129 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 MYCNOSP40205 109 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 RPL15P61313 204 aaKnown RBP13.53□□□□□ -0.24
PHGDH-232ENST00000641947 SMIM7Q9BQ49 75 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 ELOVL1Q9BW60 279 aa13.53□□□□□ -0.24
PHGDH-232ENST00000641947 ZNF727A8MUV8 499 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 F6UZH7 168 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 CLDN34H7C241 214 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 ZNF207O43670 478 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms