RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 KIR2DL5BA0A0G2JN68 375 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 KIR2DL5BA0A0G2JPC4 375 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 CFDP00746 253 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-227ENST00000641811 NUP62P37198 522 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-227ENST00000641811 DEFB135Q30KP9 77 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 KIR2DL5AQ8N109 375 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 OR1B1Q8NGR6 318 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 KIR2DL5BQ8NHK3 375 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 MUC7Q8TAX7 377 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 NRN1Q9NPD7 142 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 DOK5Q9P104 306 aa12.75□□□□□ -0.37
PHGDH-227ENST00000641811 IGSF23A1L1A6 192 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 KNCNA6PVL3 124 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 FNDC10F2Z333 226 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 DEDDO75618 318 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 PVALBP20472 110 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-227ENST00000641811 SLC38A11Q08AI6 406 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 PSMG4Q5JS54 123 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 C1orf194Q5T5A4 169 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 TMEM217Q8N7C4 229 aa12.74□□□□□ -0.37
PHGDH-227ENST00000641811 UBE2CO00762 179 aa12.73□□□□□ -0.37
PHGDH-227ENST00000641811 TEPPQ6URK8 271 aa12.73□□□□□ -0.37
PHGDH-227ENST00000641811 Q6ZWC4 215 aa12.73□□□□□ -0.37
PHGDH-227ENST00000641811 OR8I2Q8N0Y5 310 aa12.73□□□□□ -0.37
PHGDH-227ENST00000641811 GGACTQ9BVM4 153 aa12.73□□□□□ -0.37
PHGDH-227ENST00000641811 CSTL1Q9H114 145 aa12.73□□□□□ -0.37
PHGDH-227ENST00000641811 SLC25A22Q9H936 323 aa12.73□□□□□ -0.37
PHGDH-227ENST00000641811 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-227ENST00000641811 ZNF98A6NK75 572 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 SPRY2O43597 315 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 SSNA1O43805 119 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 LINC00869P0C866 280 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 H2BFSP57053 126 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 SELENOTP62341 195 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 STHQ8IWL8 128 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 TMEM252Q8N6L7 170 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 TMEM147Q9BVK8 224 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 SLC25A32Q9H2D1 315 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 FBXL17Q9UF56 701 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 SLC45A2Q9UMX9 530 aa12.72□□□□□ -0.37
PHGDH-227ENST00000641811 AGPAT2O15120 278 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 LRRC37A5PQ49AS3 106 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 ACTL10Q5JWF8 245 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 RNF183Q96D59 192 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 MGST2Q99735 147 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 SCRT1Q9BWW7 348 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 NMES1Q9C002 83 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
PHGDH-227ENST00000641811 AGRNO00468 2067 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 H0YIZ8 118 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 C3orf84H3BNL1 204 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 HYPMO75409 117 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 OR5G3P0C626 314 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 LYL1P12980 280 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 SULT1A1P50225 295 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 DEFB1P60022 68 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 PLP1P60201 277 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 SNRPD3P62318 126 aaKnown RBP12.7□□□□□ -0.38
PHGDH-227ENST00000641811 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 TRPT1Q86TN4 253 aaKnown RBP12.7□□□□□ -0.38
PHGDH-227ENST00000641811 C17orf77Q96MU5 243 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 UHRF2Q96PU4 802 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 SLC25A39Q9BZJ4 359 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-227ENST00000641811 ARL6Q9H0F7 186 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 HIGD1AQ9Y241 93 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 TP53TG1Q9Y2A0 90 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 DNAH7Q8WXX0 4024 aa12.7□□□□□ -0.38
PHGDH-227ENST00000641811 H3BRN7 92 aa12.69□□□□□ -0.38
PHGDH-227ENST00000641811 SOCS3O14543 225 aa12.69□□□□□ -0.38
PHGDH-227ENST00000641811 CA1P00915 261 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-227ENST00000641811 LINC00052Q96N35 136 aa12.69□□□□□ -0.38
PHGDH-227ENST00000641811 SHANK2-AS3Q9BTD1 123 aa12.69□□□□□ -0.38
PHGDH-227ENST00000641811 RSG1Q9BU20 258 aa12.69□□□□□ -0.38
PHGDH-227ENST00000641811 UQCC1Q9NVA1 299 aa12.69□□□□□ -0.38
PHGDH-227ENST00000641811 RLN2P04090 185 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 S100A11P31949 105 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 GALR1P47211 349 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 RAP2BP61225 183 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 CYCSP99999 105 aaKnown RBP12.68□□□□□ -0.38
PHGDH-227ENST00000641811 NHLH2Q02577 135 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 CASC10Q5T4H9 136 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 STX12Q86Y82 276 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 SEPSECSQ9HD40 501 aaKnown RBP12.68□□□□□ -0.38
PHGDH-227ENST00000641811 WDR83OSQ9Y284 106 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
PHGDH-227ENST00000641811 UBE2L5PA0A1B0GUS4 154 aa12.67□□□□□ -0.38
PHGDH-227ENST00000641811 PTTG1O95997 202 aa12.67□□□□□ -0.38
PHGDH-227ENST00000641811 GIG44P09565 113 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-227ENST00000641811 CAMLGP49069 296 aa12.67□□□□□ -0.38
PHGDH-227ENST00000641811 VWC2Q2TAL6 325 aa12.67□□□□□ -0.38
PHGDH-227ENST00000641811 PPP1R1CQ8WVI7 109 aa12.67□□□□□ -0.38
PHGDH-227ENST00000641811 A0A0J9YWU9 116 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 E5RGE8 158 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 C4BPBP20851 252 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 ID1P41134 155 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 PSMB3P49720 205 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 HBG1P69891 147 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 HBG2P69892 147 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms