RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 RNF125Q96EQ8 232 aa10.58□□□□□ -0.72
SRRT-219ENST00000641476 RAB40CQ96S21 281 aa10.58□□□□□ -0.72
SRRT-219ENST00000641476 IL5P05113 134 aa10.57□□□□□ -0.72
SRRT-219ENST00000641476 NUP62P37198 522 aaPredicted RBP10.57□□□□□ -0.72
SRRT-219ENST00000641476 SNRPD3P62318 126 aaKnown RBP10.57□□□□□ -0.72
SRRT-219ENST00000641476 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
SRRT-219ENST00000641476 CSNK1G2-AS1Q8NCQ2 148 aa10.57□□□□□ -0.72
SRRT-219ENST00000641476 OR1S1Q8NH92 325 aa10.57□□□□□ -0.72
SRRT-219ENST00000641476 SLC35E1Q96K37 410 aa10.57□□□□□ -0.72
SRRT-219ENST00000641476 PBDC1Q9BVG4 233 aa10.57□□□□□ -0.72
SRRT-219ENST00000641476 IGKV1D-37A0A075B6S9 117 aa10.56□□□□□ -0.72
SRRT-219ENST00000641476 ELOA3CA0A087WX78 387 aaPredicted RBP10.56□□□□□ -0.72
SRRT-219ENST00000641476 DUXBA0A1W2PPF3 345 aa10.56□□□□□ -0.72
SRRT-219ENST00000641476 ZFP92A6NM28 416 aa10.56□□□□□ -0.72
SRRT-219ENST00000641476 C11orf94C9JXX5 98 aa10.56□□□□□ -0.72
SRRT-219ENST00000641476 OR8G2PQ6IF36 304 aa10.56□□□□□ -0.72
SRRT-219ENST00000641476 ZNF431Q8TF32 576 aaPredicted RBP10.56□□□□□ -0.72
SRRT-219ENST00000641476 SEPSECSQ9HD40 501 aaKnown RBP10.56□□□□□ -0.72
SRRT-219ENST00000641476 DYNC1H1Q14204 4646 aaKnown RBP10.56□□□□□ -0.72
SRRT-219ENST00000641476 IAPPP10997 89 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 HLA-DMBP28068 263 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 TCTAP57738 103 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 ZNF90Q03938 601 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 GAMTQ14353 236 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 OXA1LQ15070 435 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 Q6ZTC4 211 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 LINC00336Q6ZUF6 198 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 MITD1Q8WV92 249 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
SRRT-219ENST00000641476 DNAH11Q96DT5 4516 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 PIGBOS1A0A0B4J2F0 54 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 A0A1B0GVY2 172 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 IGLL5B9A064 214 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 H3BMM0 161 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 PRAF2O60831 178 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 PITX3O75364 302 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 ADAP1O75689 374 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 HOXB5P09067 269 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 GPX4P36969 197 aaPredicted RBP10.54□□□□□ -0.72
SRRT-219ENST00000641476 ATP5IP56385 69 aaPredicted RBP10.54□□□□□ -0.72
SRRT-219ENST00000641476 LYZP61626 148 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 COQ8AQ8NI60 647 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
SRRT-219ENST00000641476 TRAV10A0A0B4J240 114 aa10.53□□□□□ -0.72
SRRT-219ENST00000641476 NKX2-1P43699 371 aaPredicted RBP10.53□□□□□ -0.72
SRRT-219ENST00000641476 NUTF2P61970 127 aaKnown RBP10.53□□□□□ -0.72
SRRT-219ENST00000641476 GGNBP1Q5YKI7 109 aa10.53□□□□□ -0.72
SRRT-219ENST00000641476 C12orf45Q8N5I9 185 aaPredicted RBP10.53□□□□□ -0.72
SRRT-219ENST00000641476 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
SRRT-219ENST00000641476 APLNQ9ULZ1 77 aa10.53□□□□□ -0.72
SRRT-219ENST00000641476 SNRPGP15A8MWD9 76 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 SOCS3O14543 225 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 FABP1P07148 127 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 SLC25A6P12236 298 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 DEFB1P60022 68 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 RAB11AP62491 216 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 OR2F1Q13607 317 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 GDF5OSQ5U4N7 250 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 TRGV9Q99603 122 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 GPN1Q9HCN4 374 aaPredicted RBP10.52□□□□□ -0.73
SRRT-219ENST00000641476 PFDN2Q9UHV9 154 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 PAIP2BQ9ULR5 123 aaKnown RBP10.52□□□□□ -0.73
SRRT-219ENST00000641476 TMED3Q9Y3Q3 217 aa10.52□□□□□ -0.73
SRRT-219ENST00000641476 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 IGKV1OR2-108A0A075B7D4 117 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 C7orf66A4D0T2 115 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 CCSO14618 274 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 PSMB3P49720 205 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 ZNF767PQ75MW2 155 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 THAP8Q8NA92 274 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 ALG5Q9Y673 324 aa10.51□□□□□ -0.73
SRRT-219ENST00000641476 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 MED6O75586 246 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 IGKV3-20P01619 116 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 AMBPP02760 352 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 C1orf194Q5T5A4 169 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 GSG1LQ6UXU4 331 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 FOXI2Q6ZQN5 318 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 PPP1R14BQ96C90 147 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 LINC00052Q96N35 136 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 MAGT1Q9H0U3 335 aa10.5□□□□□ -0.73
SRRT-219ENST00000641476 SAV1Q9H4B6 383 aaPredicted RBP10.5□□□□□ -0.73
SRRT-219ENST00000641476 DNAH17Q9UFH2 4485 aa10.49□□□□□ -0.73
SRRT-219ENST00000641476 IFNA21P01568 189 aa10.49□□□□□ -0.73
SRRT-219ENST00000641476 ID1P41134 155 aa10.49□□□□□ -0.73
SRRT-219ENST00000641476 FXYD7P58549 80 aa10.49□□□□□ -0.73
SRRT-219ENST00000641476 C12orf74Q32Q52 190 aa10.49□□□□□ -0.73
SRRT-219ENST00000641476 ZNF705AQ6ZN79 300 aaPredicted RBP10.49□□□□□ -0.73
SRRT-219ENST00000641476 ZNF709Q8N972 641 aa10.49□□□□□ -0.73
SRRT-219ENST00000641476 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
SRRT-219ENST00000641476 RNF126Q9BV68 326 aa10.49□□□□□ -0.73
SRRT-219ENST00000641476 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
SRRT-219ENST00000641476 ZNF705FA8MVS1 300 aaPredicted RBP10.48□□□□□ -0.73
SRRT-219ENST00000641476 H3BP45 60 aa10.48□□□□□ -0.73
SRRT-219ENST00000641476 WRBO00258 174 aa10.48□□□□□ -0.73
SRRT-219ENST00000641476 SYNGR2O43760 224 aa10.48□□□□□ -0.73
SRRT-219ENST00000641476 ZNF705DP0CH99 300 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms