RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 MINOS1-NBL1R4GNA1 71 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 DTX2Q86UW9 622 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 MDS2Q8NDY4 140 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 FNDC4Q9H6D8 234 aaPredicted RBP12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 SUPT4H1P63272 117 aaKnown RBP12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 A0A1B0GWJ7 208 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 B4DSR2 109 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BKO60814 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BJP06899 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BOP23527 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BBP33778 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BDP58876 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BCP62807 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST2H2BEQ16778 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BHQ93079 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 GAFA1Q96PS6 74 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BNQ99877 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 HIST1H2BMQ99879 126 aa12.07□□□□□ -0.48
HNRNPU-226ENST00000640218 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 C20orf204Q6ZNR8 217 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 GBF1Q92538 1859 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 H0YJW9 148 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 HGFACQ04756 655 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 CHCHD1Q96BP2 118 aaKnown RBP12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 TRAV8-2A0A0B4J237 113 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 NCR2O95944 276 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 HOXA3O43365 443 aaPredicted RBP12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 RNF144BQ7Z419 303 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 MTURNQ8N3F0 131 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 ABCA4P78363 2273 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 BUB1B-PAK6H3BSN5 160 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 POLEQ07864 2286 aa12.06□□□□□ -0.48
HNRNPU-226ENST00000640218 PRADC1Q9BSG0 188 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 LY6HO94772 140 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 LAGE3Q14657 143 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 PLNP26678 52 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 LINC00158P58513 81 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 LINC00205P59089 165 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 ATP5L2Q7Z4Y8 100 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 TRGV9Q99603 122 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 CNOT1A5YKK6 2376 aaKnown RBP12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 TRBV7-1A0A0A6YYK4 115 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 COL8A2P25067 703 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 ACTL10Q5JWF8 245 aa12.05□□□□□ -0.48
HNRNPU-226ENST00000640218 SRRM4A7MD48 611 aaKnown RBP12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 CGB7P0DN87 165 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 PCP4P48539 62 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 LTBP1Q14766 1721 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 ZNF329Q86UD4 541 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 MSRB2Q9Y3D2 182 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 LINC00473A8K010 186 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 FCN3O75636 299 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 AGMATQ9BSE5 352 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 MYO7BQ6PIF6 2116 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 Q6P435 159 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 DERL1Q9BUN8 251 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 CLDN16Q9Y5I7 305 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 LOC105371267A0A1B0GV96 52 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 D6R8Y8 96 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 M0R1W7 72 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 IGHV3-53P01767 116 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 NPC2P61916 151 aa12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 PHF3Q92576 2039 aaKnown RBP12.04□□□□□ -0.48
HNRNPU-226ENST00000640218 OOSP1A8MZH6 123 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 LYZL1Q6UWQ5 148 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 IGFL4Q6B9Z1 124 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 ZNF581Q9P0T4 197 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 LRRK1Q38SD2 2015 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 A0A087WX48 190 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 TRGV1A0A0A0MS02 117 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 MBD3L4A6NDZ8 208 aaPredicted RBP12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 MBD3L3A6NE82 208 aaPredicted RBP12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 MBD3L5A6NJ08 208 aaPredicted RBP12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 CMC4P56277 68 aaPredicted RBP12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 ZNF876PQ49A33 203 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 MBD3L2Q8NHZ7 208 aaPredicted RBP12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 RNF5Q99942 180 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 CXCL1P09341 107 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 KIAA2026Q5HYC2 2103 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 ZNF474Q6S9Z5 364 aaPredicted RBP12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 IGKV1D-17A0A075B6S4 117 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 GHRHP01286 108 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 ZNF138P52744 262 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 B3GALT5-AS1P59052 145 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 Q8TAT8 98 aa12.03□□□□□ -0.48
HNRNPU-226ENST00000640218 TCRAP04437 139 aa12.02□□□□□ -0.48
HNRNPU-226ENST00000640218 TDGF1P3P51864 188 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms