RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-229	ENST00000639809	HLA-DRB4	X5D2U9	266 aa		11.35	□□□□□ -0.59
SPIN3-229	ENST00000639809	C9orf170	A2RU37	121 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	C7orf66	A4D0T2	115 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	PRSS29P	A6NIE9	313 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	TOMM40	O96008	361 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	IL4	P05112	153 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	RD3L	P0DJH9	198 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	CLUHP3	Q96NS8	147 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	XCL2	Q9UBD3	114 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	FAT2	Q9NYQ8	4349 aa		11.34	□□□□□ -0.59
SPIN3-229	ENST00000639809	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	ZNF705D	P0CH99	300 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	ZNF705B	P0CI00	300 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	ANXA3	P12429	323 aa		11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	USF2	Q15853	346 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809		Q6ZNX1	250 aa		11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	ZNF431	Q8TF32	576 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	GLYATL2	Q8WU03	294 aa		11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	GPN1	Q9HCN4	374 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	CACNG5	Q9UF02	275 aa		11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	KCNIP3	Q9Y2W7	256 aa		11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	ALG5	Q9Y673	324 aa		11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	PKHD1	P08F94	4074 aa		11.33	□□□□□ -0.6
SPIN3-229	ENST00000639809	CEBPZOS	A8MTT3	80 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809	SNRPGP15	A8MWD9	76 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809	IFNA21	P01568	189 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809	SPATA31B1P	Q5VZV4	182 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809	OR8G2P	Q6IF36	304 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809	NPIPB3	Q92617	1050 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809	RFNG	Q9Y644	331 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809		U3KQ87	197 aa		11.32	□□□□□ -0.6
SPIN3-229	ENST00000639809	DNAH2	Q9P225	4427 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	RTL8C	O15255	209 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	IFNA10	P01566	189 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	ID1	P41134	155 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	ATP5I	P56385	69 aa	Predicted RBP	11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	SRPX	P78539	464 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	NMS	Q5H8A3	153 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	SAMD13	Q5VXD3	122 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	SELENOH	Q8IZQ5	122 aa	Known RBP	11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	OR51G1	Q8NGK1	321 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	LHFPL5	Q8TAF8	219 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	MITD1	Q8WV92	249 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	IL22RA2	Q969J5	263 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	GPR146	Q96CH1	333 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809	PRR13	Q9NZ81	148 aa		11.31	□□□□□ -0.6
SPIN3-229	ENST00000639809		A0A0B4J2A0	478 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	SOHLH1	Q5JUK2	328 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	C1orf194	Q5T5A4	169 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	TMEM268	Q5VZI3	342 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	FOXI2	Q6ZQN5	318 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	ZNF767P	Q75MW2	155 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	LGI3	Q8N145	548 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	LRTM2	Q8N967	370 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	COQ8A	Q8NI60	647 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	RNF125	Q96EQ8	232 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	ACY3	Q96HD9	319 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	SAV1	Q9H4B6	383 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	SHPK	Q9UHJ6	478 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	TMEM56-RWDD3	S4R434	201 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	DNAH17	Q9UFH2	4485 aa		11.3	□□□□□ -0.6
SPIN3-229	ENST00000639809	FABP1	P07148	127 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	SULT1A3	P0DMM9	295 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	SULT1A4	P0DMN0	295 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	PSG1	P11464	419 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	PSMB3	P49720	205 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	RNF212	Q495C1	297 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	UBE2DNL	Q8IWF7	75 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	TMEM170A	Q8WVE7	144 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	NIPSNAP3B	Q9BS92	247 aa		11.29	□□□□□ -0.6
SPIN3-229	ENST00000639809	PIGBOS1	A0A0B4J2F0	54 aa		11.28	□□□□□ -0.6
SPIN3-229	ENST00000639809	NXPH3	O95157	252 aa		11.28	□□□□□ -0.6
SPIN3-229	ENST00000639809	DKK2	Q9UBU2	259 aa		11.28	□□□□□ -0.6
SPIN3-229	ENST00000639809		A0A1B0GVG6	124 aa		11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809	DUXB	A0A1W2PPF3	345 aa		11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809		M0R2N4	97 aa		11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809	SSNA1	O43805	119 aa		11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809	GPX4	P36969	197 aa	Predicted RBP	11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809		Q6ZR54	194 aa		11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809	HSPB7	Q9UBY9	170 aa		11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809	GOLT1B	Q9Y3E0	138 aa		11.27	□□□□□ -0.61
SPIN3-229	ENST00000639809	ISLR	O14498	428 aa		11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	PAX9	P55771	341 aa		11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	FAM3B	P58499	235 aa	Predicted RBP	11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	EBLN2	Q6P2I7	272 aa		11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	LYZL2	Q7Z4W2	148 aa		11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	ZNF709	Q8N972	641 aa		11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	DTD1	Q8TEA8	209 aa		11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	PBDC1	Q9BVG4	233 aa		11.26	□□□□□ -0.61
SPIN3-229	ENST00000639809	hCG_2014768	A0A024R1R8	64 aa		11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	IGHV3OR16-12	A0A075B7B8	117 aa		11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	ZFP92	A6NM28	416 aa		11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	ADAP1	O75689	374 aa		11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	HBE1	P02100	147 aa		11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	MEOX2	P50222	304 aa		11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	EMP1	P54849	157 aa		11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	RRAS2	P62070	204 aa	Predicted RBP	11.25	□□□□□ -0.61
SPIN3-229	ENST00000639809	PSG9	Q00887	426 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms