RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ATG2AQ2TAZ0 1938 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 BCL9LQ86UU0 1499 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 GOLGA8QA0A0J9YX86 632 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 NBDYA0A0U1RRE5 68 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 BUB1B-PAK6H3BSN5 160 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 IGHV3-33P01772 117 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 ATP5G3P48201 142 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 KLKP1Q107X0 134 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 CDC37Q16543 378 aaPredicted RBP-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 OR51A2Q8NGJ7 313 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 SLAMF6Q96DU3 332 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 DSCR8Q96T75 97 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 BPESC1Q9GZL8 116 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 VPS13DQ5THJ4 4388 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 KIF15Q9NS87 1388 aa-3.01□□□□□ -2.89
LMBR1-222ENST00000638959 CDK13Q14004 1512 aaKnown RBP-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 A0A096LPI6 279 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 A0A0G2JMM0 328 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 A0A1W2PPB8 328 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 KIR3DP1A8MWS1 328 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 B4DSR2 109 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 ATP5J2P56134 94 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 CDC42P60953 191 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 DYNLT1P63172 113 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 PACRGQ96M98 296 aaPredicted RBP-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 EURLQ9NYK6 297 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 FAT3Q8TDW7 4589 aa-3.02□□□□□ -2.89
LMBR1-222ENST00000638959 AFDNP55196 1824 aaKnown RBP-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 A0A0D9SFI3 127 aa-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 CASQ2O14958 399 aaPredicted RBP-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 OR7C1O76099 320 aaPredicted RBP-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 FADS2O95864 444 aaKnown RBP-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 C1orf134Q5TEV5 83 aa-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 LPCAT3Q6P1A2 487 aa-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 FAM96AQ9H5X1 160 aa-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 LRPPRCP42704 1394 aaKnown RBP-3.03□□□□□ -2.89
LMBR1-222ENST00000638959 CTTNBP2Q8WZ74 1663 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 NIPBLQ6KC79 2804 aaeCLIP-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 LAMB1P07942 1786 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 LOC101927531A0A1B0GV80 90 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 ZNF815PA8K554 130 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 DISC1C4P0D8 188 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 ADAP1O75689 374 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 CRYGCP07315 174 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 PVALBP20472 110 aaPredicted RBP-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 SSBP3-AS1Q7Z2R9 100 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 JOSD2Q8TAC2 188 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 MRPL30Q8TCC3 161 aaKnown RBP-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 CNBD2Q96M20 576 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 SPRR2FQ96RM1 72 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 LINC00467Q9BRT7 94 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 UCK1Q9HA47 277 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 SCN8AQ9UQD0 1980 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 ARHGAP31Q2M1Z3 1444 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 LAMA1P25391 3075 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 HTTP42858 3142 aa-3.04□□□□□ -2.9
LMBR1-222ENST00000638959 DPRXA6NFQ7 191 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 S100A4P26447 101 aaKnown RBP-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 VBP1P61758 197 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 ANGPT1Q15389 498 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 HSP90AA4PQ58FG1 418 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 LINC00523Q86TU6 105 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 CDRT4Q8N9R6 151 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 PRADC1Q9BSG0 188 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 KIAA0232Q92628 1395 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 DNAH2Q9P225 4427 aa-3.05□□□□□ -2.9
LMBR1-222ENST00000638959 STX10O60499 249 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 IFNA10P01566 189 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 CLDN8P56748 225 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 KIAA0100Q14667 2235 aaKnown RBP-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 MED1Q15648 1581 aaPredicted RBP-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 C6orf183Q5T699 404 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 Q6ZS49 121 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 HIST1H2BLQ99880 126 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 RGCCQ9H4X1 137 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 BIN3Q9NQY0 253 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 DSPPQ9NZW4 1301 aa-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 SIPA1L2Q9P2F8 1722 aaPredicted RBP-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 NXT1Q9UKK6 140 aaKnown RBP-3.06□□□□□ -2.9
LMBR1-222ENST00000638959 RIMBP3CA6NJZ7 1639 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 RIMBP3BA6NNM3 1639 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 RIMBP3Q9UFD9 1639 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 GVQW2A0A096LPI5 108 aaPredicted RBP-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 TRAV22A0A0B4J277 110 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 MPHOSPH10O00566 681 aaKnown RBP-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 DNAL1Q4LDG9 190 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 DEFB132Q7Z7B7 95 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 BLIDQ8IZY5 108 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 OR10K1Q8NGX5 313 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 NIPSNAP1Q9BPW8 284 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 RNF122Q9H9V4 155 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 DKKL1Q9UK85 242 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 COL24A1Q17RW2 1714 aa-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 ARHGEF28Q8N1W1 1705 aaKnown RBP-3.07□□□□□ -2.9
LMBR1-222ENST00000638959 GVINP1Q7Z2Y8 2422 aa-3.08□□□□□ -2.9
LMBR1-222ENST00000638959 PRRC2CQ9Y520 2896 aaKnown RBP-3.08□□□□□ -2.9
LMBR1-222ENST00000638959 A0A087X0T9 212 aa-3.08□□□□□ -2.9
LMBR1-222ENST00000638959 IGLV1-51P01701 117 aa-3.08□□□□□ -2.9
LMBR1-222ENST00000638959 C1QBP02746 253 aa-3.08□□□□□ -2.9
LMBR1-222ENST00000638959 YPEL3P61236 119 aaPredicted RBP-3.08□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms