RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 NUP210Q8TEM1 1887 aaPredicted RBP11.71□□□□□ -0.54
SCARB2-208ENST00000638372 TRAV9-1A0A075B6T8 112 aa11.71□□□□□ -0.54
SCARB2-208ENST00000638372 LINC00587B1AMM8 73 aa11.71□□□□□ -0.54
SCARB2-208ENST00000638372 ZMAT5Q9UDW3 170 aaKnown RBP11.71□□□□□ -0.54
SCARB2-208ENST00000638372 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 RNASE4P34096 147 aaKnown RBP11.7□□□□□ -0.54
SCARB2-208ENST00000638372 UNQ6494/PRO21346Q6UXR6 183 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 H3BVH4 76 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 C5orf64Q2M2E5 130 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 HIST1H4GQ99525 98 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 IGKV3OR2-268A0A0C4DH90 116 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 A0A1B0GV90 55 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 IGKV1-39P01597 117 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 IGKV1D-39P04432 117 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 ERVK11-1P61568 191 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 BPESC1Q9GZL8 116 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 FAM215AQ9Y5M1 114 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 CEP295Q9C0D2 2601 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 CD33P20138 364 aa11.7□□□□□ -0.54
SCARB2-208ENST00000638372 RNF166Q96A37 237 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-208ENST00000638372 RNASE2P10153 161 aaKnown RBP11.69□□□□□ -0.54
SCARB2-208ENST00000638372 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 NUDT11Q96G61 164 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-208ENST00000638372 TNCP24821 2201 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 PAX9P55771 341 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 Q6AWC8 147 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 CYYR1Q96J86 154 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-208ENST00000638372 IGLV3-1P01715 115 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 HIST1H2BLQ99880 126 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 GAGE10A6NGK3 116 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 IGFL3Q6UXB1 125 aa11.69□□□□□ -0.54
SCARB2-208ENST00000638372 DNLZQ5SXM8 178 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 MIEN1Q9BRT3 115 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 TMEM242Q9NWH2 141 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 UTRNP46939 3433 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 PF4P02776 101 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 PAX8Q06710 450 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 C2orf16Q68DN1 1984 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 A0A1B0GW64 132 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 H3BUX3 64 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 CIDEAO60543 219 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 LINC00479Q96M42 142 aa11.68□□□□□ -0.54
SCARB2-208ENST00000638372 IGKV2-40A0A087WW87 121 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-208ENST00000638372 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 PSMB11A5LHX3 300 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 IGKV2D-40P01614 121 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-208ENST00000638372 OR4X2Q8NGF9 303 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 C2CD3Q4AC94 2353 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 A0A1W2PPI3 338 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 DKK1O94907 266 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 CEACAM8P31997 349 aaPredicted RBP11.67□□□□□ -0.54
SCARB2-208ENST00000638372 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 FAM90A2PQ658T7 463 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 OR11H12B2RN74 326 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 UBE2CO00762 179 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 MMP23AO75900 390 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 OR11H1Q8NG94 326 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 OR11H2Q8NH07 326 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 ASCL2Q99929 193 aa11.67□□□□□ -0.54
SCARB2-208ENST00000638372 IGFL4Q6B9Z1 124 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 PRSS22Q9GZN4 317 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 YAE1D1Q9NRH1 226 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 UBE2L6O14933 153 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 TRGV9Q99603 122 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 FOXC2Q99958 501 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 K7EM74 188 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 TCRAP04437 139 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 CD7P09564 240 aa11.66□□□□□ -0.54
SCARB2-208ENST00000638372 ZNF256Q9Y2P7 627 aaPredicted RBP11.66□□□□□ -0.54
SCARB2-208ENST00000638372 FAM181BA6NEQ2 426 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.65□□□□□ -0.54
SCARB2-208ENST00000638372 PIP4P1Q86T03 277 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 ZNF329Q86UD4 541 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 IGLV1-44P01699 117 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 NDPQ00604 133 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 HIST3H2BBQ8N257 126 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 DUX3Q96PT4 197 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 MOB4Q9Y3A3 225 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 NAV2Q8IVL1 2488 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 ZNF134P52741 427 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 GNB1LQ9BYB4 327 aa11.65□□□□□ -0.54
SCARB2-208ENST00000638372 AMBPP02760 352 aa11.65□□□□□ -0.55
SCARB2-208ENST00000638372 MINOS1Q5TGZ0 78 aa11.65□□□□□ -0.55
SCARB2-208ENST00000638372 Q8TAT8 98 aa11.65□□□□□ -0.55
SCARB2-208ENST00000638372 SCGB3A1Q96QR1 104 aa11.65□□□□□ -0.55
SCARB2-208ENST00000638372 MINOS1-NBL1R4GNA1 71 aa11.65□□□□□ -0.55
SCARB2-208ENST00000638372 PCNX3Q9H6A9 2034 aa11.64□□□□□ -0.55
SCARB2-208ENST00000638372 TMEM238LA0A1B0GVL6 79 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms